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PLM3_5_b1_sep16_scaffold_974_4

Organism: PLM3_5_b1_sep16_Acidothermus_cellulolyticus_64_13

near complete RP 49 / 55 MC: 2 BSCG 48 / 51 MC: 2 ASCG 15 / 38 MC: 1
Location: comp(3231..3797)

Top 3 Functional Annotations

Value Algorithm Source
betA3; choline dehydrogenase (EC:1.1.99.1) similarity KEGG
DB: KEGG
  • Identity: 49.2
  • Coverage: 59.0
  • Bit_score: 56
  • Evalue 6.10e-06
hypothetical protein Tax=Nocardiopsis alkaliphila RepID=UPI000345A2A3 similarity UNIREF
DB: UNIREF100
  • Identity: 65.3
  • Coverage: 49.0
  • Bit_score: 58
  • Evalue 7.40e-06
Choline dehydrogenase {ECO:0000313|EMBL:KJE50817.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. USM B20.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 45.6
  • Coverage: 79.0
  • Bit_score: 59
  • Evalue 3.60e-06

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Taxonomy

Burkholderia sp. USM B20 → Burkholderia → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 567
ATGACCCTCCCCCACACCAGGTACACCTCGCTGAGTGAGGCCGGCGGTCTCGACGCCATCGTGGTGGGTAGCGGCTTCGGCGGTGCGGTGGCCGGTGCCCGGTTGGCCCAGGCCGGTCTGCGGGTGGCGATTCTGGAGCGTGGACCATGGACATCGAGGGAGCCACCACGGCACGTCCGGTTGCCGGCACGCTGGAACTCTTCCCCGATGCTGGTGATGTCGCCATGCGATATCGTTTCAACGGCAGCGAAGACGACGGTGACTGCTCTCGTTCTTGTTGGCACCAAGCGTCAACACCGCCTGAACCACCTCCGGCTTTGGTCCGACCTGACCACCTTGGACATCGAGGCCGCAGGCACCGTTGGTCGCCTCCGCATCACCCCACTGGGAACGCTGAAACCTTGGCAGCCCCATCCGTGGCGACGCGTTCACCCGCGGCAAGCGTGCTGCCGCCGTAGCACGCTTTTTGACCTACTTCACGAGAAGCGCGCTGCGAGGCATGATGCGCGGTTAGGCGTGGAGGGCTGCGAGGCGCGATTTCGCCCGGCTCGGAAGCCGGACGGCTGA
PROTEIN sequence
Length: 189
MTLPHTRYTSLSEAGGLDAIVVGSGFGGAVAGARLAQAGLRVAILERGPWTSREPPRHVRLPARWNSSPMLVMSPCDIVSTAAKTTVTALVLVGTKRQHRLNHLRLWSDLTTLDIEAAGTVGRLRITPLGTLKPWQPHPWRRVHPRQACCRRSTLFDLLHEKRAARHDARLGVEGCEARFRPARKPDG*