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PLM3_5_b1_sep16_scaffold_556_17

Organism: PLM3_5_b1_sep16_Acidothermus_cellulolyticus_64_13

near complete RP 49 / 55 MC: 2 BSCG 48 / 51 MC: 2 ASCG 15 / 38 MC: 1
Location: comp(14428..15444)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase factor sigma-70 {ECO:0000313|EMBL:KGM16343.1}; EC=2.7.7.6 {ECO:0000313|EMBL:KGM16343.1};; species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Actinotalea.;" source="Actinotalea fermentans ATCC 43279 = JCM 9966 = DSM 3133.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 63.0
  • Coverage: 327.0
  • Bit_score: 413
  • Evalue 1.70e-112
RNA polymerase factor sigma-70 Tax=Rhodococcus RepID=T1VR77_RHOER similarity UNIREF
DB: UNIREF100
  • Identity: 60.2
  • Coverage: 327.0
  • Bit_score: 397
  • Evalue 7.10e-108
RNA polymerase sigma-70 factor family protein similarity KEGG
DB: KEGG
  • Identity: 63.3
  • Coverage: 324.0
  • Bit_score: 399
  • Evalue 5.30e-109

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Taxonomy

Actinotalea fermentans → Actinotalea → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1017
GTGACTGTTGCCGTTGATGACGATGTATTCGCCTCCTTGGTGGAGCCGCTGCGCAGGGAACTGACCGTCCACTGCTATCGGATGTCAGGCTCGGTGCATGATGCGGAGGACCTGGTCCAGGAGACCTACCTACGAGCGTGGCGCGGCTTTCGCGACTTTGAAAATCGCTCGTCGGTGCGCACCTGGATGTATCGGATCGCCACCAATGTCTGCCTCACTGCGCTGGACAGTCGGGCGCGCCGGCCGATGCCCACAGGCCTTGGCCAGCCCAGTTCGGACCCGTTCGGCGCGCTGGAGTCGCGCGCCGAGATGACCTGGCTGGAACCGGTGCCTGACTCGGTGGTGTGGGGCGGTGCTCCCGATGATCCTGCGGCCGAAGTCGTTGACCGGGAGAGCGTCCGGTTGGCGTTCATCGCAGCCTTGCAACATCTGACGCCACCCCAGCGTGCGGTGTTGATCTTGCGTGATGTCCTGGCCTGGCAGGCTAGCGAGGTGGCCGCACTGCTGGACATGTCGACCGCTGCGGTGAATAGCAGCCTGCAGCGCGCGAGGGCGCAGGTGCACAAGCTCGATTCGGAGAATTCTGTCGAGCATCTCGATGACGAGCACGCGAAAGCCCTACTGGCCGACTACGTGGCCGCGTTCGAGAACTATGACGTCGAACGGATCGTGGCACTGCTTGCCGAGGACGCGGTCTGGGAGATGCCGCCCTATCTTGGCTGGTACGAAGGCCCCACCGCTATTGGTCACCTCATCGAGACGCATTGTCCCGCTGAGGCGCCCGGAGATCAGATCATGGTGCCCGCTTCCGCGAACGGGCAGCCCGCCTTTGCGCTCTATATGAAGCAGCCTGACGGATCCCATCGCGCGTTCCAGCTCCAAGTGCTCACCCTGACTAGCAAGGGCGTTTCACACGTGAGCACGTTCTTCGACACGACGCTGTTCGAACAGTTCGGACTGTCTGAGGTTCTGGTCCGGGGCGCGCGTACTCCTGCAACGCTCACGTCAGATGCATGA
PROTEIN sequence
Length: 339
VTVAVDDDVFASLVEPLRRELTVHCYRMSGSVHDAEDLVQETYLRAWRGFRDFENRSSVRTWMYRIATNVCLTALDSRARRPMPTGLGQPSSDPFGALESRAEMTWLEPVPDSVVWGGAPDDPAAEVVDRESVRLAFIAALQHLTPPQRAVLILRDVLAWQASEVAALLDMSTAAVNSSLQRARAQVHKLDSENSVEHLDDEHAKALLADYVAAFENYDVERIVALLAEDAVWEMPPYLGWYEGPTAIGHLIETHCPAEAPGDQIMVPASANGQPAFALYMKQPDGSHRAFQLQVLTLTSKGVSHVSTFFDTTLFEQFGLSEVLVRGARTPATLTSDA*