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PLM3_5_b1_sep16_scaffold_467_2

Organism: PLM3_5_b1_sep16_Acidothermus_cellulolyticus_64_13

near complete RP 49 / 55 MC: 2 BSCG 48 / 51 MC: 2 ASCG 15 / 38 MC: 1
Location: comp(114..599)

Top 3 Functional Annotations

Value Algorithm Source
Helix-turn-helix domain protein Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SLZ8_NOCSJ similarity UNIREF
DB: UNIREF100
  • Identity: 75.8
  • Coverage: 161.0
  • Bit_score: 253
  • Evalue 1.00e-64
helix-turn-helix domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 75.8
  • Coverage: 161.0
  • Bit_score: 253
  • Evalue 2.90e-65
Helix-turn-helix domain protein {ECO:0000313|EMBL:ABL82833.1}; species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 75.8
  • Coverage: 161.0
  • Bit_score: 253
  • Evalue 1.40e-64

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Taxonomy

Nocardioides sp. JS614 → Nocardioides → Propionibacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 486
ATGCTCGAAACAAGCACCACCCAGTCCGAGTTGTCCCGTGTCAGCGGTGTGCATCAGCCCAGCATCAGCCAGTTCCTTTCCGGAAAGGTCGAGTTGAGCGATGAGCAACTCGATCGGCTCCTGTCGTGCATGGGTTATCGACTTGAGGTAGTCCGACGTCCCGTCGTGCCCGAGCTGACCCGCTCCGAACGACGGTCGTGGCGACTCCACCGCCAGCTCTCAACACATCTGACGCGAACGAGCCTGGAGCAGTGGCGGCCGACCATCGAGCGCAACTTGGAGCGGCTCCGCAACGGCGTCAGCGGCGAGCCGCACGGGCGCAATCTCGACCGGTGGATGACGCTGATCGATCGCGGCGATGTGCCAGGGCTCCACCGCGTCTTGACAGGGTTGGACCGGGACTCGATCGAGATGCGTGAGGTTTCGCCGATGGGCGGGCTGCTCTCGCAGGACGAGCGTATGGACGTGCTCCAGATGGCCAGTTGA
PROTEIN sequence
Length: 162
MLETSTTQSELSRVSGVHQPSISQFLSGKVELSDEQLDRLLSCMGYRLEVVRRPVVPELTRSERRSWRLHRQLSTHLTRTSLEQWRPTIERNLERLRNGVSGEPHGRNLDRWMTLIDRGDVPGLHRVLTGLDRDSIEMREVSPMGGLLSQDERMDVLQMAS*