ggKbase home page

PLM3_5_b1_sep16_scaffold_877_2

Organism: PLM3_5_b1_sep16_Acidothermus_cellulolyticus_64_13

near complete RP 49 / 55 MC: 2 BSCG 48 / 51 MC: 2 ASCG 15 / 38 MC: 1
Location: 486..1103

Top 3 Functional Annotations

Value Algorithm Source
TetR family transcriptional regulator Tax=Frankia sp. Iso899 RepID=UPI0003B56B04 similarity UNIREF
DB: UNIREF100
  • Identity: 49.2
  • Coverage: 191.0
  • Bit_score: 173
  • Evalue 1.30e-40
Transcriptional regulator, TetR family {ECO:0000313|EMBL:CEL13157.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kibdelosporangium.;" source="Kibdelosporangium sp. MJ126-NF4.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 44.6
  • Coverage: 184.0
  • Bit_score: 149
  • Evalue 3.70e-33
TetR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 39.6
  • Coverage: 192.0
  • Bit_score: 137
  • Evalue 2.30e-30

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Kibdelosporangium sp. MJ126-NF4 → Kibdelosporangium → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 618
ATGGTTAAACGGGACCGTATTGCGAAATCTGGCAGGCCGTATCAGCTACGCGCACGCGCCGATGCGATGGATCGCACTCGCGCGCGGATCACCCGGGCCGCGATTGAGCTTCACGGAACCGTCGGTCCGGCCGCGACGACGATGAGTGCCGTCGCCGAGCGGGCGGGCGTAACCCGGGCCACGCTCTACCGCCACTTCCCTAGCGAGGGGGCACTCTTCACGGCCTGCAGCGCAGAGTGGCGGAGCGCGAACCCGTCCCCCGATCCGGCCCAATGGGCAGCCATTGTTGATCCGTACGATCGGCTAACGACAGCGCTGCCAGCGCTCTACAGCTGGTACCGATCAGCCGAGGCGATGCGAAGCAACCTGCTTCGCGACCTCGCCGTGCTGCCACCCGCCATCCGTACCGGAATCGAGTCCTATCCACGGACCGTCGCCGATGTGCTGGATTCCGGTTGGCCGCGTCGATCACGACTGCGTCGGGCCGCTATCGGCCACGGCGTCGCCTTCGAGACCTGGCAGTCGCTGGCGCCGACCGCGGAGCAAGGAAGGAGATCTCGGCCGAGCGCGGGATCGAAAACGACGGTCCAGGCAGCCCAGACACCTATGAAATGCTGA
PROTEIN sequence
Length: 206
MVKRDRIAKSGRPYQLRARADAMDRTRARITRAAIELHGTVGPAATTMSAVAERAGVTRATLYRHFPSEGALFTACSAEWRSANPSPDPAQWAAIVDPYDRLTTALPALYSWYRSAEAMRSNLLRDLAVLPPAIRTGIESYPRTVADVLDSGWPRRSRLRRAAIGHGVAFETWQSLAPTAEQGRRSRPSAGSKTTVQAAQTPMKC*