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PLM3_5_b1_sep16_scaffold_3985_8

Organism: PLM3_5_b1_sep16_Acidothermus_cellulolyticus_64_13

near complete RP 49 / 55 MC: 2 BSCG 48 / 51 MC: 2 ASCG 15 / 38 MC: 1
Location: 4754..5032

Top 3 Functional Annotations

Value Algorithm Source
Putative transmembrane anti-sigma factor Tax=Frankia sp. (strain EuI1c) RepID=E3J9T5_FRASU similarity UNIREF
DB: UNIREF100
  • Identity: 49.4
  • Coverage: 81.0
  • Bit_score: 80
  • Evalue 5.20e-13
transmembrane anti-sigma factor similarity KEGG
DB: KEGG
  • Identity: 49.4
  • Coverage: 81.0
  • Bit_score: 80
  • Evalue 1.50e-13
Putative transmembrane anti-sigma factor {ECO:0000313|EMBL:ADP84588.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EuI1c).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 49.4
  • Coverage: 81.0
  • Bit_score: 80
  • Evalue 7.30e-13

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Taxonomy

Frankia sp. EuI1c → Frankia → Frankiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 279
ATGAACGACGAGCAACGCGCACCCGGCCTGACGGTCAGCTGTCAGGAGGTCGTGGAACTGGTTACCGACTACCTCGAGGGTGTGCTCGACCCGGACATGACCGAAGAGGTGGAGGCCCACCTCGGCCTCTGCAAAGGCTGCGCCACTTACGTGGCACAGATGCGCGACACCATTCGCGCGCTCGGCACAGTGCCAGTCGCCACGCTGAGCGAGGATGCGCAGGCCGAGCTGGTACGAGCCTTTCGCGACCTGCGCGGGCCTGCGGCATCGGAATCGTGA
PROTEIN sequence
Length: 93
MNDEQRAPGLTVSCQEVVELVTDYLEGVLDPDMTEEVEAHLGLCKGCATYVAQMRDTIRALGTVPVATLSEDAQAELVRAFRDLRGPAASES*