ggKbase home page

PLM3_5_b1_sep16_scaffold_6011_4

Organism: PLM3_5_b1_sep16_Acidothermus_cellulolyticus_64_13

near complete RP 49 / 55 MC: 2 BSCG 48 / 51 MC: 2 ASCG 15 / 38 MC: 1
Location: 2484..2768

Top 3 Functional Annotations

Value Algorithm Source
Site-specific recombinase XerD Tax=Blastococcus saxobsidens (strain DD2) RepID=H6RU40_BLASD similarity UNIREF
DB: UNIREF100
  • Identity: 56.3
  • Coverage: 87.0
  • Bit_score: 93
  • Evalue 7.90e-17
site-specific recombinase XerD similarity KEGG
DB: KEGG
  • Identity: 56.3
  • Coverage: 87.0
  • Bit_score: 93
  • Evalue 2.20e-17
Site-specific recombinase XerD {ECO:0000313|EMBL:CCG05647.1}; species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Blastococcus.;" source="Blastococcus saxobsidens (strain DD2).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 56.3
  • Coverage: 87.0
  • Bit_score: 93
  • Evalue 1.10e-16

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Blastococcus saxobsidens → Blastococcus → Geodermatophilales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 285
ATGGACATGTTCGGACCCTGCAGGGTAAGCGCGGCAACCGACCAAGCGACTTGGCTAGATGATCAAGGCCGCGAGCGGGTGAAGACATTCGCCAAGATGGGTGAAGCCAGAGATCACCTCAACCTCATGGAGGGCGCCAAGGTCTCGGGGCACTACATCGACACTTCGAGCAAAATCACGGTTGCCGAGTACGCGCGGCAGTGGGCAGCTAACCGGCCGCACCGCTCGACTACCGCCATACGCGTCCGGTCATTGATCGATAAGCACATCGACGGCACCCGCTAG
PROTEIN sequence
Length: 95
MDMFGPCRVSAATDQATWLDDQGRERVKTFAKMGEARDHLNLMEGAKVSGHYIDTSSKITVAEYARQWAANRPHRSTTAIRVRSLIDKHIDGTR*