ggKbase home page

PLM3_5_b1_sep16_scaffold_5029_1

Organism: PLM3_5_b1_sep16_Acidothermus_cellulolyticus_64_13

near complete RP 49 / 55 MC: 2 BSCG 48 / 51 MC: 2 ASCG 15 / 38 MC: 1
Location: comp(2..463)

Top 3 Functional Annotations

Value Algorithm Source
Alpha amylase catalytic region Tax=Bradyrhizobium oligotrophicum S58 RepID=M4Z6J7_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 56.7
  • Coverage: 157.0
  • Bit_score: 186
  • Evalue 1.90e-44
alpha amylase catalytic region similarity KEGG
DB: KEGG
  • Identity: 56.7
  • Coverage: 157.0
  • Bit_score: 186
  • Evalue 5.40e-45
Alpha-amylase {ECO:0000313|EMBL:ETK37901.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 60.4
  • Coverage: 154.0
  • Bit_score: 186
  • Evalue 2.70e-44

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Microbispora sp. ATCC PTA-5024 → Microbispora → Streptosporangiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 462
GTGTGGTGGGTTGATCATGTGATCTGGTGGCAGGTTTATCCGCTGGGCTTTCTTGGGGCTGAGAAGGAGCTGGGCCCGTTCCAGGGTGAGGTGAACCGGCTGCCCAGGCTGCAGGGCTGGCTGGATCACCTGATTTCGTGGGGCGGCAACGGTTTGTTGCTGGGCCCGATCTTCACTTCCAGCACGCACGGCTATGACACCGTCGACTACTTTCAGATCGATCCGCGGTTGGGTGATGAGGCTGACTTCGACGCCTTGGTGGCAGCCTGCCGGGAACGGGGGGTGCGGCTGCTGCTGGACGGTGTCTTCAACCATGTAGGCCGAGACTTCCCCCCGGTGGCGCAGGCCCTGGCTGAGGGGCCAGGATCGCCAACCCAGGATTGGGTGTCTCAGCTTTACGACACCGACGGTGTCATCACCGCGGACTACTTCGAGGGCCACGACACCCTGATTACCCTCAAC
PROTEIN sequence
Length: 154
VWWVDHVIWWQVYPLGFLGAEKELGPFQGEVNRLPRLQGWLDHLISWGGNGLLLGPIFTSSTHGYDTVDYFQIDPRLGDEADFDALVAACRERGVRLLLDGVFNHVGRDFPPVAQALAEGPGSPTQDWVSQLYDTDGVITADYFEGHDTLITLN