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PLM3_5_b1_sep16_scaffold_8162_7

Organism: PLM3_5_b1_sep16_Acidothermus_cellulolyticus_64_13

near complete RP 49 / 55 MC: 2 BSCG 48 / 51 MC: 2 ASCG 15 / 38 MC: 1
Location: comp(4708..5631)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma24 factor Tax=Actinopolymorpha alba RepID=UPI000374ABE5 similarity UNIREF
DB: UNIREF100
  • Identity: 85.0
  • Coverage: 307.0
  • Bit_score: 529
  • Evalue 1.40e-147
sig11; ECF subfamily RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 82.2
  • Coverage: 303.0
  • Bit_score: 511
  • Evalue 1.10e-142
Putative RNA polymerase ECF-subfamily sigma factor {ECO:0000313|EMBL:BAC68619.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces avermitilis (strain ATCC 31267 / DSM 46492 / JCM 5070 /; NCIMB 12804 / NRRL 8165 / MA-4680).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 82.2
  • Coverage: 303.0
  • Bit_score: 511
  • Evalue 5.60e-142

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Taxonomy

Streptomyces avermitilis → Streptomyces → Streptomycetales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 924
GTGACCCGGACGGAGGAGTTCCAAGACCTGCGGCCGCTGCTGTTCGCGATCGCCTACCGAATTCTCGGCAGCGTGAGCGAGGCCGAGGACGCCGTTCAGGAGACCTGGCTGCGCTACGAGGCCTCCCCGACACAACCCACGTCGATCAAAGCCTTCCTCTCGGCCATAGTGACCCGGATCGCGATCGATGTGTTGCGGTCGGCTCGCAGCCGGCGGGAGGCCTACGTCGGGCCGTGGTTCCCCGAGCCGCTGCTCACCGACCCCTACGAGGACCCGGAACGCTCGGCGGAGCTGGCCGACTCGTTGTCAATGGCGGCGCTGTTGCTGCTCGAGCGGCTGACCCCGCTGGAGCGCGCGGTCTTTGTGCTGCGGGAGGTGTTCGGATTCAGTTTCGGCGAGATCGCGTCGGCGGTGGGGCGATCGGAGGCGGCGTGCCGGCAGCTCGCGGTGCGGGCGCGGCGGCACATGGACGCGGGCAGACCCCGATTCGAGGCCGACCGAAGGGAGCGCGACGAACTCGCTGAGCGATTCTTCGACGCCTTCAAGGAAGGGGACGTCGATGGGCTTCGGGAGCTTCTCGCTGCTGATGTTCAGATAGTCGGCGACGGCGGCGGCAAGGCCCCGCAGTGGGCCAGAGGCATCATCGGCGCCGAGAACGTGGCCCGGGTACTTGCCGCGATCGTCCCGCCGTTCGTACGGATCGGCGTCGTCGTGGAGCCGCACGAGGTGAACGGCCAGCCCGGCGCGATCTTCCGCGACCGGGACGGCAAGGTGATCAATACCTGGACGCTTGACGTCCTCGATGGGCAGATCCAGACGATCCGCGCAGTGATCAACCCCGACAAACTCGGGCACGTGGGTCCAGTGGCCGACGCCTGGGCGGTCCTGCGGGAGGCGAACCAGGCTCGCCGGGCCGCAGATTGA
PROTEIN sequence
Length: 308
VTRTEEFQDLRPLLFAIAYRILGSVSEAEDAVQETWLRYEASPTQPTSIKAFLSAIVTRIAIDVLRSARSRREAYVGPWFPEPLLTDPYEDPERSAELADSLSMAALLLLERLTPLERAVFVLREVFGFSFGEIASAVGRSEAACRQLAVRARRHMDAGRPRFEADRRERDELAERFFDAFKEGDVDGLRELLAADVQIVGDGGGKAPQWARGIIGAENVARVLAAIVPPFVRIGVVVEPHEVNGQPGAIFRDRDGKVINTWTLDVLDGQIQTIRAVINPDKLGHVGPVADAWAVLREANQARRAAD*