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PLM3_5_b1_sep16_scaffold_9820_8

Organism: PLM3_5_b1_sep16_Acidothermus_cellulolyticus_64_13

near complete RP 49 / 55 MC: 2 BSCG 48 / 51 MC: 2 ASCG 15 / 38 MC: 1
Location: comp(3353..3496)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein Tax=Amycolatopsis nigrescens RepID=UPI00037C5DF2 similarity UNIREF
DB: UNIREF100
  • Identity: 63.6
  • Coverage: 44.0
  • Bit_score: 56
  • Evalue 5.40e-06
ECF subfamily RNA polymerase sigma-70 factor similarity KEGG
DB: KEGG
  • Identity: 61.4
  • Coverage: 44.0
  • Bit_score: 56
  • Evalue 2.00e-06
RNA polymerase sigma-70 factor, ECF subfamily protein {ECO:0000313|EMBL:AEK41209.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis mediterranei (strain S699) (Nocardia mediterranei).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 61.4
  • Coverage: 44.0
  • Bit_score: 56
  • Evalue 9.80e-06

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Taxonomy

Amycolatopsis mediterranei → Amycolatopsis → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 144
CGGGCGCCGCTGGTGCTGCGGACGTTCGAGGGCTGCTCGTATGAGGAGATCGCCGGGGTGCTCGGCATCAGCGTGGCGGCAGTGCGTGGACGGCTGCACCGGGCGCGGCTTGAGTTGTTGGAGGCTATGCGACCATGGGCGTGA
PROTEIN sequence
Length: 48
RAPLVLRTFEGCSYEEIAGVLGISVAAVRGRLHRARLELLEAMRPWA*