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PLM3_5_b1_sep16_scaffold_33986_3

Organism: PLM3_5_b1_sep16_Acidothermus_cellulolyticus_64_13

near complete RP 49 / 55 MC: 2 BSCG 48 / 51 MC: 2 ASCG 15 / 38 MC: 1
Location: comp(1156..1755)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator catR Tax=Bordetella holmesii RepID=M5NMR4_9BORD similarity UNIREF
DB: UNIREF100
  • Identity: 35.4
  • Coverage: 181.0
  • Bit_score: 89
  • Evalue 2.40e-15
bacterial regulatory helix-turn-helix, lysR family protein similarity KEGG
DB: KEGG
  • Identity: 35.4
  • Coverage: 181.0
  • Bit_score: 89
  • Evalue 6.90e-16
HTH-type transcriptional regulator CatR {ECO:0000313|EMBL:KAK85581.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella holmesii CDC-H809-BH.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 35.4
  • Coverage: 181.0
  • Bit_score: 89
  • Evalue 3.40e-15

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Taxonomy

Bordetella holmesii → Bordetella → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 600
ATGCACACCCTCGAGCAGGTCGCGGCGCTGCGGGGGGGCCGGCTTGATGTGGGCCTGACCTGGCACCCCGACCCGGGCGAGGACCTTGACGCGTACGTGCTGGCGCTGGTGCCGTTCCTAGCCGTCTTGCCCCACGGCCACCCGCTGGCGGGCAAGCAGCACCTGGCCCGCCGCGACCTCATCGGTCAACCCTTGGTGGCGCTGGTGCCCCACCCCGACCACCCCCGCCTGCACGAGCACCTGCTGCGACAGCTGCGGACCGAGCCCGACGGCAGCCAGGTGCCACTGACGGTCGCCGCCGACGAGCCTTTCACCCCTGAGCACATGCTGCCGCTGGTGGTCGCCGGGACTGGGATCGGGCTGCTCCCGCTGACCCTGGCCGCCGAGGTCCCCAACCAGGATGTTGTGCTGTGCCCATTCATGGACCAGCCTCCCAGCGCCTCGGTGACCCTCCTCTGGCGTCGGGACGACACCCGCCCGAGCGTAGCCAAGGTGACCCAGACGTTGCGCCAGCTCGGCGACCAAGGCGCCTTCCTCCCCGAAAGTCCTCTGGCTGACGACCGGCCGGGCAGCTCTGGCGGCGTTATGTCCTCAGCCTGA
PROTEIN sequence
Length: 200
MHTLEQVAALRGGRLDVGLTWHPDPGEDLDAYVLALVPFLAVLPHGHPLAGKQHLARRDLIGQPLVALVPHPDHPRLHEHLLRQLRTEPDGSQVPLTVAADEPFTPEHMLPLVVAGTGIGLLPLTLAAEVPNQDVVLCPFMDQPPSASVTLLWRRDDTRPSVAKVTQTLRQLGDQGAFLPESPLADDRPGSSGGVMSSA*