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PLM3_5_b1_sep16_scaffold_50046_4

Organism: PLM3_5_b1_sep16_Acidothermus_cellulolyticus_64_13

near complete RP 49 / 55 MC: 2 BSCG 48 / 51 MC: 2 ASCG 15 / 38 MC: 1
Location: 1439..3010

Top 3 Functional Annotations

Value Algorithm Source
Putative RNA polymerase, sigma-24 subunit, ECF subfamily Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F713_CONWI similarity UNIREF
DB: UNIREF100
  • Identity: 63.4
  • Coverage: 366.0
  • Bit_score: 446
  • Evalue 3.50e-122
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 64.8
  • Coverage: 366.0
  • Bit_score: 459
  • Evalue 5.60e-126
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 63.4
  • Coverage: 366.0
  • Bit_score: 446
  • Evalue 9.90e-123

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Taxonomy

Microbispora sp. ATCC PTA-5024 → Microbispora → Streptosporangiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1572
ATGCGTGACCGATCCGACAGTACCGGCGTCCCGGACAAGCCCGGCGCGTGGATGATGACGATCGCCAAGCGTCGGGCAGTGGACCAGTTCCGGCGGCGCGACCGCCGTGATCAGCTCTACGCCGCTATCGCTCATGGGCAAGGAAGCGATGTGTCTGAGGAAGACTTCCTCGCCGCGGTCGACCACGTGGAAGACGACGTGCTGCGGCTGATGTTCGTCTGCTGCCACCCGGTCCTGACGCCGGAGGCACAGTGCACGCTGACACTGAAGCTGGTTGCCGGGTTGACCACCCGCGAGATCGCGCGAGCGTATCTGACGACGGAGGCGACCGTCGCACAACGGGTGGTTCGAGCAAAGCGGACCCTCACCGACGCCGGCGCGGCCTTGGAGGAGCCGAGCGAGGCCGAGCGCGCCGAGCGGCTGACCACTGTGCTCAGCGTGATCTACCTGCTCTACAACGAGGGATATTCAGCCACCGCCGGCAGCGAGTGGATGCGACCAACGCTCTGTGACGAGGCGCTCCGACTCGGGCGAATCCTCGCCGCGCTGGCTCCTCGAAAGAGCGAGGTGCACGGCCTGTCGGCGCTCATGGAGCTCCAGTCCTCTCGGCTGGCGGCGCGCATCGCCGAGGACGGGTCGCCGATCTTGTTGCTTGATCAGGACCGCTCGCGGTGGGATCCAGTACACATCATGCGCGGTTTCGCCGCGCTGGAACGGGCGGAGGCAAGCACGACCGAGCTGGGCCCGTACGCCCTTCAGGCTGCGATCGCAGCCTGCCACGCCCGGGCCCAGACGGCGGAGGCCACCGACTGGGTACGCATAGCCGAGCTATACGAGCAGTTGGCTCGGCTCACCGGCTCGCCCGTGGTGGAGGTGAACCGCGCGGTCGCACTCGGCATGGCGTACGGACCGGAGGCCGGGCTGGCCTTGCTTGATCAGCTGGAAGGGCTACCGGCACTGAGTGGCTATCACCTGATGCCCAGCGTGCGGGGTGACTTGTTGGACAAGCTCGGGCGGCGGGAGGAGGCCCGGGCGGAGTTCGCACGGGCGGCGACGATGACCCAGAACGAACGGGAACGCGCGTTGCTGTTGGAGCGCGCGAGCGGGAGGTCCGACAGCGAGCGGCGGCTCACTCCCGACGGCGAACGCCACGCACTCGACGTGGGGGACTATCTGCGGGCGGAAAGCATCACGGTCGACACCGTCTTGTGCTCGAGCGCAGCCCGCGCGCAGCAGACGCTCGAGCTTCTCAAGTTGGGTGATCAGCTGAACCTGGATCGTGTGGAAATCGCTGACCGTTTCTACAACGCAGGCGGCGATACGTTGATCAACGCAGTCCGAGAGCTTCCCGACGATTGCCACGTTGCGCTGCTCATCGGCCACGCGCCCGGCGCACCAGGCCTCGTGCACGAAATGACAGACCCAGCCACCTCCAGGCCGGAGGCAGTGAGCGCGATCGAGAGTCGCTTTCCGGCTGCCGCTCTGGCTCAGCTGGAGTTCGAAGGTGACTGGTCTGAGATCGATGCAGGCTCGCTGGTGTCCGTCCGGATGCCTGGTTCTGACGGCCACTGA
PROTEIN sequence
Length: 524
MRDRSDSTGVPDKPGAWMMTIAKRRAVDQFRRRDRRDQLYAAIAHGQGSDVSEEDFLAAVDHVEDDVLRLMFVCCHPVLTPEAQCTLTLKLVAGLTTREIARAYLTTEATVAQRVVRAKRTLTDAGAALEEPSEAERAERLTTVLSVIYLLYNEGYSATAGSEWMRPTLCDEALRLGRILAALAPRKSEVHGLSALMELQSSRLAARIAEDGSPILLLDQDRSRWDPVHIMRGFAALERAEASTTELGPYALQAAIAACHARAQTAEATDWVRIAELYEQLARLTGSPVVEVNRAVALGMAYGPEAGLALLDQLEGLPALSGYHLMPSVRGDLLDKLGRREEARAEFARAATMTQNERERALLLERASGRSDSERRLTPDGERHALDVGDYLRAESITVDTVLCSSAARAQQTLELLKLGDQLNLDRVEIADRFYNAGGDTLINAVRELPDDCHVALLIGHAPGAPGLVHEMTDPATSRPEAVSAIESRFPAAALAQLEFEGDWSEIDAGSLVSVRMPGSDGH*