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PLM3_5_b1_sep16_scaffold_61118_6

Organism: PLM3_5_b1_sep16_Acidothermus_cellulolyticus_64_13

near complete RP 49 / 55 MC: 2 BSCG 48 / 51 MC: 2 ASCG 15 / 38 MC: 1
Location: 2725..3042

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma-70 factor, ECF family protein Tax=Azospirillum amazonense Y2 RepID=G1Y371_9PROT similarity UNIREF
DB: UNIREF100
  • Identity: 54.2
  • Coverage: 107.0
  • Bit_score: 110
  • Evalue 5.40e-22
RNA polymerase sigma-70 factor, ECF family protein {ECO:0000313|EMBL:EGY00035.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Nitrospirillum.;" source="Nitrospirillum amazonense Y2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 54.2
  • Coverage: 107.0
  • Bit_score: 110
  • Evalue 7.60e-22
RNA polymerase similarity KEGG
DB: KEGG
  • Identity: 55.3
  • Coverage: 103.0
  • Bit_score: 109
  • Evalue 3.40e-22

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Taxonomy

Nitrospirillum amazonense → Nitrospirillum → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 318
ATGGCCCGGGTCGCGCGTGGCGACGAGCGGGCATTCCAGCAGCTTTCGCGCCGCCATTTGCCGGCCATGCTCGGGCTCGCCCGGCGCATCCTTGGCAATGCGGCTGAGGCGGAGGATGTGGCGCAAGAGGCGTTCATGCGCGTCTGGACCCACGCGCCACGGTGGCAACCGCTGGCGCAATTCCGGACCTGGCTTACGCGCGTCGTCACCAATCTGTGCCTCGACCGCAAGCGACGCGCTCCGTGGGTCGAACTGGAAGCGGCCGGTGAAATCGTCGATCCGGCGCTCGGTGCCGGCGACAAGATAGAAGGTGATGAG
PROTEIN sequence
Length: 106
MARVARGDERAFQQLSRRHLPAMLGLARRILGNAAEAEDVAQEAFMRVWTHAPRWQPLAQFRTWLTRVVTNLCLDRKRRAPWVELEAAGEIVDPALGAGDKIEGDE