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PLM3_5_b1_sep16_scaffold_2726_4

Organism: PLM3_5_b1_sep16_Actinobacteridae_Actinomycetales_73_13

near complete RP 41 / 55 MC: 3 BSCG 44 / 51 MC: 5 ASCG 12 / 38 MC: 3
Location: comp(2425..3177)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, TetR family Tax=Rhodococcus sp. JVH1 RepID=J1ZCS3_9NOCA similarity UNIREF
DB: UNIREF100
  • Identity: 64.9
  • Coverage: 225.0
  • Bit_score: 303
  • Evalue 1.80e-79
AcrR family transcriptional regulator {ECO:0000313|EMBL:AII08204.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus opacus (Nocardia opaca).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 66.1
  • Coverage: 224.0
  • Bit_score: 308
  • Evalue 4.50e-81
TetR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 65.2
  • Coverage: 224.0
  • Bit_score: 299
  • Evalue 7.20e-79

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Taxonomy

Rhodococcus opacus → Rhodococcus → Corynebacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 753
ATGGCCACCCAGACCGACCCCGGCCCGGCGCCCCGGGCCCCCCTGACCAGGCAGCGGGTGCTGGACGCCGCCGTCGAGCTCGCCGACAGGGACGGTGTCGGGTCGCTCAGCATGCGCAAGCTCGCCCAGGAGCTCGGGGTCGAGGCCATGTCCCTGTACCACCACGTGGCCAACAAGGACGCCATCCTGGACGGCCTCATCGACATCGTGTTCAGCGAGATCGAGCTGCCCTCCGGCCAGACCGGCTGGAGGGAAGCCATGCGCCAGCGGGCCGTCTCGGCCCGGGAGGCGCTGCGGCGCCATCCCTGGGCGACCAGCCTGATGGAGTCGCGGCCCACCCCCGGCCCGGCGAACCTGCGACACCACGACGCCGTCCTCGGCATCCTGCGCAACGCCGGCTTCTCGATCGAGCTGGCCGCCCACGCCTATTCCCTGCTGGACGCCTACATCTACGGGTTCGCGCTGCAGGAGACCAGCCTGCCGCTCGGCACGCCGGAGGAGACCGCCGAGGTGGCCAAGGCGATCATGGCCGAGTTCGCGGCCGGCACCTACCCGCATCTCACCGAGATCGCCGTCGAGCACGTCCTGCAGCCCGGCTACGACTACGGCAACGAGTACCAGTTCGGGCTCGACCTGATCCTGGACGGCCTCGACCGGGCCCTCGGCGCTCCCTCGACCGGGAACAGCGGCGCCGTATCGGTCAAGGGCCCGGCCAGGGCGGCCGACCTCAAAGAGACAGGGCGACTGCCCTGA
PROTEIN sequence
Length: 251
MATQTDPGPAPRAPLTRQRVLDAAVELADRDGVGSLSMRKLAQELGVEAMSLYHHVANKDAILDGLIDIVFSEIELPSGQTGWREAMRQRAVSAREALRRHPWATSLMESRPTPGPANLRHHDAVLGILRNAGFSIELAAHAYSLLDAYIYGFALQETSLPLGTPEETAEVAKAIMAEFAAGTYPHLTEIAVEHVLQPGYDYGNEYQFGLDLILDGLDRALGAPSTGNSGAVSVKGPARAADLKETGRLP*