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PLM3_5_b1_sep16_scaffold_4197_6

Organism: PLM3_5_b1_sep16_Actinobacteridae_Actinomycetales_73_13

near complete RP 41 / 55 MC: 3 BSCG 44 / 51 MC: 5 ASCG 12 / 38 MC: 3
Location: comp(6100..7989)

Top 3 Functional Annotations

Value Algorithm Source
transposase Tax=Saccharopolyspora spinosa RepID=UPI0002378F52 similarity UNIREF
DB: UNIREF100
  • Identity: 64.7
  • Coverage: 563.0
  • Bit_score: 710
  • Evalue 9.20e-202
Transposase {ECO:0000313|EMBL:EKT78877.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus opacus M213.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 63.8
  • Coverage: 563.0
  • Bit_score: 703
  • Evalue 2.70e-199
transposase similarity KEGG
DB: KEGG
  • Identity: 42.5
  • Coverage: 562.0
  • Bit_score: 408
  • Evalue 2.80e-111

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Taxonomy

Rhodococcus opacus → Rhodococcus → Corynebacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1890
ATGGCAAGCCTGGTGGGCAAGCGCCGCGGCGGACGCACCTACTACTACCTGGTGGAGTCGGCCCGGGTGGCTGGCAAGCCCCGCATCATCGCTCAGCAGTATTTGGGCAGCGGCGAGGAACTGGCCGCGCGGCTGTCGCAGACCGGCCCGGGCGAGCCCGCCCGCACCCGCCACCGGGCCTTTGGGGACCTGGCCGCGGCCTGGCAGGTGCTGCAACGGCTGCAGGTGGCGCAGGTGATTGACGAGCAGGTCGGGTCGCGGCGGGCGGACGCGGCCGCCTCGGTGGGCACCTACCTGGCCTTGGCAGCCTGTAACCGGGTGGTGGCGCCCCGCTCCAAGCTCGCCTTCGCTGGCTGGTGGCAGACCACCGCCGGGGACCGGCTGGTCAAGCTGCCGGCGGCCGCGCTGGACCACCGTCGCTTCTGGGACGCCATGGACACCCTTCAGGTCAGGGCGCTGCGGGCCGCCGAGCGAGCGATCGCGGCTCGGATGGTCGAGGTGTTCGACCTGGACCTGGCCGGGTTGGTGCTGGACATGACCAACTTCGCCACCTTCGTGGACTCGGCCAACCAGCGCAACACCATCGCCCAGCGAGGCCATGCCAAGCAGAAGCGGTTGGATCTGCGCCTGGTCGGGGTCGGGCTGGTGGTGACCGCCGATGGCGGCGTGCCCGTCCTCAGCCACGCCTACCAGGGCAACCGGCCCGACGTGACCCAGTTCTCGGCGGTGATCGACGAGCTGGTCGCCCGCTTCGGGAGGCTGGCGCGGGCCACCGACGCGCTGACGGTGGTCTATGACGCCGGCTGCGACTCGGCCGACGGCCAGGCCGACGTCCAGGCCAGCCCGCTGCACTTCGTCGGCAGCCTGCGCCCATCCGACCATCCCGACCTGCTGGCCATCCCGGCCCGCCGCTTCCGGGTGGTCGACACCACCCGCTTCCCGGGCCTCACGGCCGTGGAGACCCGCACGATGGCGTTGGGCGCCGACCGGCGGGTGGTCATCACCCACTCCGAGACTTTCCACCTGCGCCAGGTCAGAGGGTTCGAGCAGACCCTCGCCAAGGCCCGCCGTCGCCTGGCCACCCTGCAGGCCCGCCTGGCCCGTGGCCGCACCCGCCGACCACGCCAGGCGGTCGAGGCCGAGATCACCGACATCCTCAACCCTCGCTGGCTCTCCCGAGTCATCACCTGGCAGCTTGCCGGCGAGGAACCGGCCAGCCTGCGGCTGAGGTGGCGCACCGACCCGGCAGCCAAGCGGCGCCTGGCGCGTGAGGTGTTCGGCAAGCGCCTGCTGTTCACCGACCGGGAGGACTGGCCGCTGGCCGAGGTCGTGGCCGCCTACCGCTCCCAGGCCGACGTGGAGGCCGGCTTCCGGCAGCTCAAAGACCCCAAGGTCGTCTCCTTCAGTCCGATGTTCCACTGGACCGACCAGAAGATCCGCGTGCACGTCTTCTACTGCGTGCTGGCGCTGGCGGTGGCGCACCTGCTACGCCGCCAGGCCGCCCAGGCCGGCATCGTGATGAGCGTGCGGGAACTGTTGGCGACCCTGGCCGGCATCCAGGAGACCGTCCTGCTGTATCAGGGCGCGAGGGGCCGCCCCCGAGCCCGGCACGTGCTGACCGAGATGGACCCGATCCAGCAGCGCCTGTACGACCTGTTCAGCCTGCGAGCCAGCCAGGAAACTCGCGCTAGTCGCCTGCTACGGTTCTCATCACTGGGAGGCCGAGCGGTGAAGACCATCTATATGGTCACTCGGCGTCTGTCCAACCCGACCGAGTCTGGCGAGGCTCTCCCGTCGCCGGTGTCGAGCGCTCCCGTCCTCTGCCCGTCACCTCGGATGCAGTTTCTTCCGAGAACCCCTGGTAGACGGGAATTGATGCCTTCAAGCTAA
PROTEIN sequence
Length: 630
MASLVGKRRGGRTYYYLVESARVAGKPRIIAQQYLGSGEELAARLSQTGPGEPARTRHRAFGDLAAAWQVLQRLQVAQVIDEQVGSRRADAAASVGTYLALAACNRVVAPRSKLAFAGWWQTTAGDRLVKLPAAALDHRRFWDAMDTLQVRALRAAERAIAARMVEVFDLDLAGLVLDMTNFATFVDSANQRNTIAQRGHAKQKRLDLRLVGVGLVVTADGGVPVLSHAYQGNRPDVTQFSAVIDELVARFGRLARATDALTVVYDAGCDSADGQADVQASPLHFVGSLRPSDHPDLLAIPARRFRVVDTTRFPGLTAVETRTMALGADRRVVITHSETFHLRQVRGFEQTLAKARRRLATLQARLARGRTRRPRQAVEAEITDILNPRWLSRVITWQLAGEEPASLRLRWRTDPAAKRRLAREVFGKRLLFTDREDWPLAEVVAAYRSQADVEAGFRQLKDPKVVSFSPMFHWTDQKIRVHVFYCVLALAVAHLLRRQAAQAGIVMSVRELLATLAGIQETVLLYQGARGRPRARHVLTEMDPIQQRLYDLFSLRASQETRASRLLRFSSLGGRAVKTIYMVTRRLSNPTESGEALPSPVSSAPVLCPSPRMQFLPRTPGRRELMPSS*