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PLM3_5_b1_sep16_scaffold_4304_5

Organism: PLM3_5_b1_sep16_Actinobacteridae_Actinomycetales_73_13

near complete RP 41 / 55 MC: 3 BSCG 44 / 51 MC: 5 ASCG 12 / 38 MC: 3
Location: comp(2614..3213)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily Tax=Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / G-20) RepID=D2S9K0_GEOOG similarity UNIREF
DB: UNIREF100
  • Identity: 54.9
  • Coverage: 184.0
  • Bit_score: 189
  • Evalue 2.90e-45
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 54.9
  • Coverage: 184.0
  • Bit_score: 189
  • Evalue 8.30e-46
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:ADB75800.1}; species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Geodermatophilus.;" source="Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 /; G-20).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 54.9
  • Coverage: 184.0
  • Bit_score: 189
  • Evalue 4.10e-45

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Taxonomy

Geodermatophilus obscurus → Geodermatophilus → Geodermatophilales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 600
GTGCGAGGAACGCCCTACGGGGGCCTCCGGGACGGCCAGCTGGTCGAGCTCGTGGCCCAGCAGGACGCGGGCGCCCTGGAAGCGCTGTACGACCGCTACGGGCGGGCCGCCTACTCGCTCGCGCGCCGGATCCTGACCGAGGAGACGTTGGCGCAGGATGTCGTGCAGGAGGTGTTCCTCTCGCTGTGGCGTGACGCACGTCGGTTCGACGCTGGGCGGGGGACGGTCGCCACCTATCTGCTGTCGATGACCCACCACCGCGCCGTCGACGTGGTGCGCCGCGAGGAGAACCTGCGCCGCTGGCGGACCTCGGACGAGGGGCTGGAGCTGGCGCCCGACCCCAAGGCCCGAGTCGAGGACGAGGTCGAGGCGTCCGAGCGCCGAGCCGAGGTCCGGGCGGCCCTCAAGGACCTGCCAGACCCCCAGCGCCAGGCGCTCCTGCTCGCCTACTTTGGGGGCTACACCCAGCGGGAGGTCGCGGCCCTGGTCGGGGTGCCCCTTGGCACGGTGAAGACCCGCATGGCGGCCGGCATGCGCAAGATGAAAGAGGCGTTGTCGGACGCCGGTCGTGAGGAGCAGCAGCCGTGGACACGCCAATGA
PROTEIN sequence
Length: 200
VRGTPYGGLRDGQLVELVAQQDAGALEALYDRYGRAAYSLARRILTEETLAQDVVQEVFLSLWRDARRFDAGRGTVATYLLSMTHHRAVDVVRREENLRRWRTSDEGLELAPDPKARVEDEVEASERRAEVRAALKDLPDPQRQALLLAYFGGYTQREVAALVGVPLGTVKTRMAAGMRKMKEALSDAGREEQQPWTRQ*