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PLM3_5_b1_sep16_scaffold_3646_7

Organism: PLM3_5_b1_sep16_Actinobacteridae_Actinomycetales_73_13

near complete RP 41 / 55 MC: 3 BSCG 44 / 51 MC: 5 ASCG 12 / 38 MC: 3
Location: comp(4914..5384)

Top 3 Functional Annotations

Value Algorithm Source
Transcription activator effector binding protein Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2BAM5_STRRD similarity UNIREF
DB: UNIREF100
  • Identity: 42.7
  • Coverage: 150.0
  • Bit_score: 100
  • Evalue 8.20e-19
AraC family transcriptional regulator {ECO:0000313|EMBL:ETK32118.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 45.0
  • Coverage: 149.0
  • Bit_score: 107
  • Evalue 1.20e-20
transcription activator effector binding protein similarity KEGG
DB: KEGG
  • Identity: 42.7
  • Coverage: 150.0
  • Bit_score: 100
  • Evalue 2.30e-19

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Taxonomy

Microbispora sp. ATCC PTA-5024 → Microbispora → Streptosporangiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 471
GTGAGGCCGGAGCGGGTTCGTCGGGTCGAGGCGCGGGTCGTCGGCATCCAGGCGCAGACCTCCAGCGTGGCGGAGGCCGACCCGGGCACCGCGGCCGTCCCCGACCTGTGGCGCCGGTTCGACGCCGAGGAGCTGGGCGGCCGCATCCCCGGCCGGGCCCCGGCCCGGACCACCTGCGCGGTCTTCAGCGACTACCAGGACGGCGGCCGGCGCTTCCGCTGCCTGGTCGGGGCCGAGGTGGCCGGCGACGGCGACCTGCCGGTGGGGATGGTGGCGGTGACCGTGCCCGCCGGCGACTACCTGGTGTTCGCGGCCCGCGGGCCGATGCCGGGGGCGCTGGCCGCGACCTGGGCCAGGATCGCCGAGTTCTTCGATCACGCAACCATGGCCAGGGCCTTCACCGCCGACCTGGAGGTCCACTACCCGGCCGGGTCGGCCGTTGACGTGTTCGTGGCCATCGGCGACGGCTGA
PROTEIN sequence
Length: 157
VRPERVRRVEARVVGIQAQTSSVAEADPGTAAVPDLWRRFDAEELGGRIPGRAPARTTCAVFSDYQDGGRRFRCLVGAEVAGDGDLPVGMVAVTVPAGDYLVFAARGPMPGALAATWARIAEFFDHATMARAFTADLEVHYPAGSAVDVFVAIGDG*