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PLM3_5_b1_sep16_scaffold_6353_3

Organism: PLM3_5_b1_sep16_Actinobacteridae_Actinomycetales_73_13

near complete RP 41 / 55 MC: 3 BSCG 44 / 51 MC: 5 ASCG 12 / 38 MC: 3
Location: comp(1830..3569)

Top 3 Functional Annotations

Value Algorithm Source
Succinate dehydrogenase flavoprotein subunit {ECO:0000256|RuleBase:RU362051}; EC=1.3.5.1 {ECO:0000256|RuleBase:RU362051};; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. CpI1-S.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 70.5
  • Coverage: 586.0
  • Bit_score: 832
  • Evalue 3.50e-238
sdhA; succinate dehydrogenase flavoprotein subunit (EC:1.3.5.1 1.3.99.1) similarity KEGG
DB: KEGG
  • Identity: 69.6
  • Coverage: 601.0
  • Bit_score: 828
  • Evalue 7.90e-238
Succinate dehydrogenase or fumarate reductase, flavoprotein subunit Tax=Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432) RepID=C5BZ82_BEUC1 similarity UNIREF
DB: UNIREF100
  • Identity: 69.6
  • Coverage: 601.0
  • Bit_score: 828
  • Evalue 2.80e-237

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Taxonomy

Frankia sp. CpI1-S → Frankia → Frankiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1740
ATGACCCAGCAGCACACCTTCGACGTGGTGATCGTCGGAGCCGGGGGGGCCGGCCTGCGGGCGGCGCTGGAGAGCTCCCGGCGGGGCCGGACGGCGGTGATCACCAAGCTGTACCCGACCCGCTCCCACACCGGGGCCGCCCAGGGCGGGATGTGCGCCGCCCTGGCCAACGTCGAAGAGGACAACTGGGAGTGGCACACCTTCGACACCATCAAGGGCGGCGACTACCTGGTCGACCAGGACGCGGCCGAGATCATGTGCCGGGAGGCGATCGAGGCCGTCTACGACCTCGAGCACATGGGGATGCCGTTCAACCGCACCCCCGAGGGCAAGATCGACCAGCGGCGCTTCGGCGGCCACACCCACCACCACGGCGCCGGGGCGGTGCGCCGCTCCTGCTTCGCCGCCGACCGCACCGGCCACATGATCCTCCAGACCCTGTTCCAGCAGAACGTCAAGCAGGGCACCATCTTCTTCGACGAGTTCTACGTGCTCGACCTGCTGCGGGCCCCGGACGACGGCCGGGCCGCCGGGCTGGTCGCCTACGAGCTGGCCACCGGCGAGCTGCACGTGTTCCGGGCCAAGTCGGTGGTCTTCTGCACCGGCGGCTACGGGAAGATGTTCAAGATCACCTCCAACGCCCACGCCCTCACCGGCGACGGCCCCGGGGTCTGCTACCGGCGCGGCGTGCCCATGGAGGACATGGAGTTCTTCCAGTTCCACCCGACCGGCCTGTACCGCCTGGGGGTGCTGCTGAGCGAGGCCGCCCGGGGCGAGGGCGGCATCCTGCGCAACGCCGACGGCGAGGCGTTCATGGAGCGCTACGCCCCCACCATCAAGGACCTCGCCCCCCGTGACATGGTCAGCCGGGCCATCTACACCGAGATCCGCGAGGGCCGCGGCGCCGGGCCCAACGGCGACTACGTCTACCTGGACGTCAGTCACCTCGACCCCAAGGTGATCGACGCCAAGCTGCCCGACATCACCGAGTTCGCCCGCACCTACCTGGGCGTCGAGCCCAAGAAGGAGGGCGTGCCGATCGTCCCGACGGCCCACTACGCCATGGGCGGCATCCCCACCACCGTCGACGCCCAGGTGGTCGGCGACGCGGCCAACACGCCGATCCCGGGGCTGTTCGCGGCCGGCGAGTGCGCCTGTGTGTCGGTGCACGGGGCCAACCGGCTCGGCACCAACTCGCTGCTGGACATCGTCGTGTTCGGCAAGCGGGCCGGGGTCAACGCCGGCGACCACGCCGCCCAGGTCGACCACGCCGAGCTGGGCGAGGACCCGGCCGGCGCCGTCACGACGATGCTGGAGGGCCTGGCCGGCCACCCCGAGGGCGAGCGGGCCGCCGCCATCCGGGGTGACCTCCAGGTCAACATGGACGACAAGGCCGGGGTGTACCGCACCGAGACCCTCCTCAAGGAGATGGAGGTCGAGCTGGCCTCGCTGCATGAGCGCTACGCCCGGGTCTGGGTCCAGGACACCTCCCGGCGCTACAACACCGACCTGCTGGAGGCGGTCGAGCTGGGGTTCCTGCTCGACCTGGCCGAGGCCCTGGTCGTCTCGGCCCGGGCCCGCACCGAGAGCCGCGGCGGCCACTTCCGCGAGGACCACCCGGTCCGCGACGACAAGAACTGGCTCAAGCACAGCCTGGCCTCGCGCGGCGACAGCGGGGTCAAGCTCGACTACAAGCCGGTCACCATCACTCGGTATCAGCCTATGGAGAGGAAGTACTGA
PROTEIN sequence
Length: 580
MTQQHTFDVVIVGAGGAGLRAALESSRRGRTAVITKLYPTRSHTGAAQGGMCAALANVEEDNWEWHTFDTIKGGDYLVDQDAAEIMCREAIEAVYDLEHMGMPFNRTPEGKIDQRRFGGHTHHHGAGAVRRSCFAADRTGHMILQTLFQQNVKQGTIFFDEFYVLDLLRAPDDGRAAGLVAYELATGELHVFRAKSVVFCTGGYGKMFKITSNAHALTGDGPGVCYRRGVPMEDMEFFQFHPTGLYRLGVLLSEAARGEGGILRNADGEAFMERYAPTIKDLAPRDMVSRAIYTEIREGRGAGPNGDYVYLDVSHLDPKVIDAKLPDITEFARTYLGVEPKKEGVPIVPTAHYAMGGIPTTVDAQVVGDAANTPIPGLFAAGECACVSVHGANRLGTNSLLDIVVFGKRAGVNAGDHAAQVDHAELGEDPAGAVTTMLEGLAGHPEGERAAAIRGDLQVNMDDKAGVYRTETLLKEMEVELASLHERYARVWVQDTSRRYNTDLLEAVELGFLLDLAEALVVSARARTESRGGHFREDHPVRDDKNWLKHSLASRGDSGVKLDYKPVTITRYQPMERKY*