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PLM3_5_b1_sep16_scaffold_7481_4

Organism: PLM3_5_b1_sep16_Actinobacteridae_Actinomycetales_73_13

near complete RP 41 / 55 MC: 3 BSCG 44 / 51 MC: 5 ASCG 12 / 38 MC: 3
Location: 1315..1794

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 64.8
  • Coverage: 128.0
  • Bit_score: 177
  • Evalue 2.00e-42
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Transcriptase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Geodermatophilus.;" source="Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 /; G-20).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 64.8
  • Coverage: 128.0
  • Bit_score: 177
  • Evalue 9.90e-42
DNA-directed RNA polymerase subunit beta Tax=Geodermatophilaceae RepID=D2SHB5_GEOOG similarity UNIREF
DB: UNIREF100
  • Identity: 64.8
  • Coverage: 128.0
  • Bit_score: 177
  • Evalue 7.10e-42

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Taxonomy

Geodermatophilus obscurus → Geodermatophilus → Geodermatophilales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 480
ATGATGGGCACGCTCGAGAAGGACCACACCAAGACCGAAGAGGACGCGCTGGTCGAGATCTACCGGCGCCTGCGCCCGGGCGAGCCGCCCAGCGCCGAGTCCGGCCGCCAGCTCCTGCACGGGCTGTTCTTCCAGTCCAAGCGCTACGACCTGGCCAAGGTCGGCCGCTACAAGATCAACAAGAAGCTGGGCCTCGACCCCGAGCAGCACAAGGCCCTGACCCTCACCACCGACGACGTGGTGGCCACCGTCGACTACCTGGTCCGGCTGCACGAGGGCGACCCCTCGACCAGCACCGACGACCAGGACCACTTCGGCAACCGGCGCCTGCGCTCGGTCGGCGAGCTGATCCAGAACCAGGTCCGCATCGGCCTGTCGCACCTCGCAGCTCAGCCAGTTCATGGACCAGACCAACCCGCTGGCCGCCCTGACCCACCGGCGGCGCCTGTCGGCGCTCGGCCCGGGCGGGCTGTCGCGTGA
PROTEIN sequence
Length: 160
MMGTLEKDHTKTEEDALVEIYRRLRPGEPPSAESGRQLLHGLFFQSKRYDLAKVGRYKINKKLGLDPEQHKALTLTTDDVVATVDYLVRLHEGDPSTSTDDQDHFGNRRLRSVGELIQNQVRIGLSHLAAQPVHGPDQPAGRPDPPAAPVGARPGRAVA*