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PLM3_5_b1_sep16_scaffold_7481_5

Organism: PLM3_5_b1_sep16_Actinobacteridae_Actinomycetales_73_13

near complete RP 41 / 55 MC: 3 BSCG 44 / 51 MC: 5 ASCG 12 / 38 MC: 3
Location: 1844..4018

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Transcriptase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EuI1c).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 76.3
  • Coverage: 730.0
  • Bit_score: 1071
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta Tax=Frankia sp. (strain EuI1c) RepID=E3J3C2_FRASU similarity UNIREF
DB: UNIREF100
  • Identity: 76.3
  • Coverage: 730.0
  • Bit_score: 1071
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta similarity KEGG
DB: KEGG
  • Identity: 76.3
  • Coverage: 730.0
  • Bit_score: 1071
  • Evalue 0.0

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Taxonomy

Frankia sp. EuI1c → Frankia → Frankiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 2175
ATGTGCCCGATCGAGACGCCCGAGGGCCCGAACATCGGCCTCATCGGCAACCTCTCGACCTACGCCCGGATCAACGAGTACGGGTTCGTGGAGACGCCCTACCGCAAGGTGGTCGACGGCCGGGTCACCGAGCAGGTCGACTACCTGACCGCCGACGACGAGGACCTGCACGTGATCGCGCAGGCCAACGCGGCCGTCGACGCCCAGGGCAACTTCGCCACCGACCGCGTCCTGGTCCGCCAGGGCAGCCGCTCGGCCGGCATCTCCAGCCAGCGCTCGGTCAGCCGGTCCGACTTCGGCACCGGGCAGGGCGCCGGGGTCACCGGCGAGGTGGCCAACGTGCCGCCCGACGAGGTCGACTACATGGACGTCAGCCCCCGGCAGATGGTGTCGGTGGCCACCGCCCTGATCCCGTTCCTGGAGCACGACGACGCCAACCGGGCCCTGATGGGGGCCAACATGCAGCGTCAGGCCGTGCCCCTGCTCCGCTCCGAGGCGCCGCTGGTCGGCACCGGCATGGAGCGGCGGGTGGCGGTCGACGCCGGCGGGGTTGTCGTCGCCGACGCCCCGGGCACGGTCGAGGACGTCACCGCCGACCAGGTCACCGTCCGCCACGCCGACGGCTCGGCCAAGGTCTACCGGATGCGCAAGTTCGAGCGCTCCAACCAGGGCACCTGCATCAACCAGAAGCCGATCGTGGTCGAGGGCGCCAAGATCGCCGCCGGCGACGTGCTGGCCGACGGGCCCTGCACCGACACCGGCGAGCTGGCGCTCGGCAAGAACCTCCTGGTCGCGTTCATGCCCTGGGAGGGCCACAACTACGAGGACGCCATCATCCTCTCCGAGCGCCTGGTCAAGGACGACGTCCTGACCTCGATCCACATCGAGGAGCACGAGGTCGACGCCCGCGACACCAAGCTCGGGGCCGAGGAGATCACCCGGGACATCCCCAACGTCTCCGAGGACGTGCTCAAGGACCTGGACGAGCGGGGCATCATCCGCATCGGGGCCGAGGTCGACCCCGGCGACGTCCTGGTCGGCAAGGTCACGCCCAAGGGCGAGACCGAGCTGACCCCCGAGGAGCGCCTCCTGCGCGCGATCTTCGGGGAGAAGGCCCGCGAGGTCCGCGACACCTCCCTGAAGGTCCCCCACGGCGAGACCGGCAAGGTCATCGGCGTGCGGGTGTTCTCCCGCGAGGCCGGCGACGACCTCAACCCGGGCGTGAACCAGCTGGTCCGGGTCTACGTCGCCCAGAAGCGGAAGATCTCCGACGGCGACAAGCTGGCCGGCCGCCACGGCAACAAGGGCGTCATCTCCAAGATCCTCCCTGAGGAGGACATGCCCTTCCTGGTCGACGGCACCCCGATCGACGTCATCCTCAACCCGCTCGGCGTGCCGAGCCGGATGAACATCGGCCAGGTGCTGGAGACCCACCTCGGCTGGGTGGCCGCCCACGGCTGGTCGTTCGACACCCTGCCCGGCTGGGCCAAGGAGACTGGCTGGACCAAGGAGCAGGGCCGCCAGGACGTGACGCGGCCGCTGGGCACCCCGGTGTTCGACGGCGCCAACGAGGAGGCCATCGAGGACCTGCTCACGGCCACCCTCGGCACCTACGAGGACCCGATCGACGGCGAGACCCACAAGCTGGTCGACGCCGAGGGCAAGGCGATGCTGTTCGACGGCCGCTCCGGCGAGCCGTACCCGACCCCGGTCACCGTCGGCTTCATCTACATCATGAAGCTGCTGCACCTGGTGGACGACAAGATCCACGCCCGCTCCACCGGCCCCTACTCGATGATCACCCAGCAGCCGCTTGGCGGGAAGGCGCAGTTCGGTGGCCAGCGCTTCGGCGAGATGGAGGTCTGGGCCCTCGAGGCCTACGGCGCCGCCTACGCCCTGCAGGAGCTGCTCACCATCAAGTCCGACGACGTCCTGGGCCGGGTGAAGGTCTACGAGGCGATCGTCAAGGGCGAGAACATCCCCGAGCCCGGCATCCCTGAGTCCTTCAAGGTGCTGATCAAGGAGATGCAGTCGCTCTGCCTGAACGTCGAGGTGCTCTCGGCCGAAGGCCAGGAGATCGAGATGCGGGAGACCGACGAGGACGTGTTCCGAGCCGCCGAGGAGCTTGGTATCGACCTCTCGCGGCGTGAGCCTTCGTCGGTCGAGGAGGTTTAA
PROTEIN sequence
Length: 725
MCPIETPEGPNIGLIGNLSTYARINEYGFVETPYRKVVDGRVTEQVDYLTADDEDLHVIAQANAAVDAQGNFATDRVLVRQGSRSAGISSQRSVSRSDFGTGQGAGVTGEVANVPPDEVDYMDVSPRQMVSVATALIPFLEHDDANRALMGANMQRQAVPLLRSEAPLVGTGMERRVAVDAGGVVVADAPGTVEDVTADQVTVRHADGSAKVYRMRKFERSNQGTCINQKPIVVEGAKIAAGDVLADGPCTDTGELALGKNLLVAFMPWEGHNYEDAIILSERLVKDDVLTSIHIEEHEVDARDTKLGAEEITRDIPNVSEDVLKDLDERGIIRIGAEVDPGDVLVGKVTPKGETELTPEERLLRAIFGEKAREVRDTSLKVPHGETGKVIGVRVFSREAGDDLNPGVNQLVRVYVAQKRKISDGDKLAGRHGNKGVISKILPEEDMPFLVDGTPIDVILNPLGVPSRMNIGQVLETHLGWVAAHGWSFDTLPGWAKETGWTKEQGRQDVTRPLGTPVFDGANEEAIEDLLTATLGTYEDPIDGETHKLVDAEGKAMLFDGRSGEPYPTPVTVGFIYIMKLLHLVDDKIHARSTGPYSMITQQPLGGKAQFGGQRFGEMEVWALEAYGAAYALQELLTIKSDDVLGRVKVYEAIVKGENIPEPGIPESFKVLIKEMQSLCLNVEVLSAEGQEIEMRETDEDVFRAAEELGIDLSRREPSSVEEV*