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PLM3_5_b1_sep16_scaffold_9567_5

Organism: PLM3_5_b1_sep16_Actinobacteridae_Actinomycetales_73_13

near complete RP 41 / 55 MC: 3 BSCG 44 / 51 MC: 5 ASCG 12 / 38 MC: 3
Location: 2530..4083

Top 3 Functional Annotations

Value Algorithm Source
Lipopolysaccharide biosynthesis protein Tax=Actinoplanes sp. N902-109 RepID=R4L7R8_9ACTO similarity UNIREF
DB: UNIREF100
  • Identity: 30.6
  • Coverage: 513.0
  • Bit_score: 212
  • Evalue 8.40e-52
lipopolysaccharide biosynthesis protein similarity KEGG
DB: KEGG
  • Identity: 30.6
  • Coverage: 513.0
  • Bit_score: 212
  • Evalue 2.40e-52
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 36.9
  • Coverage: 504.0
  • Bit_score: 286
  • Evalue 6.40e-74

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Taxonomy

RBG_19FT_COMBO_Actinobacteria_70_19_curated → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1554
GTGAGTGCAGAGCCTGCGCCGAGCGGATCGGTGGAGCTACGCGATTACCTGAGGGTGTTCAGGCGGCAGCTCGCGCTGATCGTGGCCATCACCCTGCTGGGGGCGGCGGCCGCGGCCGCCTACACCTTCCGCCGTACCCCGGTCTACGAATCGAGCGCCTCGGTGCTGGTCAGGGCGATCACCACCAACGCCTTCGACCCCGGTTCGCGGGTCGACCAGCAGCTCAACATGTTCAACCAGCGTCAGCTGGCCCAGTCGGAGCCGGTGGCCGCGCTCGCGGCCAAGACGCTCCAGACCACCGCCACCCCGGCCCAGCTGCTGGAGCACGTCAACGTCGACGTGCCCGCCAACTCCCAGATCCTGCGGGTCAGGTACCAGGACACGGTGCCGCTGACCGCCCAGCGGGGCGCCGACGCCTTCGCCAAGGCGTACCTGGTCTCCCGTGAGGCCGACGCCCGGGCCCAGGCCACGACCAGCCAGAAGAGCCTCCAGAGGGACATCGCCAGGTTCCAGAAGCAGGCCTCGGCGGCCGAGAAGCAGATCGCCGACCCCGACGCCGACTCCGCCACCCGTCAGGCCGCCCAGGCCAAGCTGGCCGCGGCCAACAACCGCCTCGACCAGCTGCTCAGCCAGCTCAGCGGGTTCCAGTCGCTCGACTTCACCCCGGGCACGGTGATCGCCGCCGCCGGCCTGCCGGCCTCCCCGGCCAGCCCCAACAACCGCCTCGACGTCGGCATCGGCCTGCTCGTGGGGCTGTTCCTCGGGGTCGTGCTCGCCTTCGTCCGCGACCGCACCGACGACCGGTTGCGGGGTCGCGAGGACCTGGCCGAGCGCCTCGACCGGCCGGTCCTGGCCACCATCCCGCCCCTGTCCAAGCGGGTCCGCCAGGAGGGCAAGCTGCGCTGGAAGCGGCGGAGCAGGAACAGCCTCGTCACCCTGGAGCAGCCCAACAGCCCGGCCGCCGAGGCCTACCGGACCCTGCGGACCCGCATGGCCCGCCTGGCCAGCCAGCTCGACATCAACTCGGTGATGGTCGTCTCGGCCGGGGTGGGGGAGGGCAAGAGCACCACCGCGGCCAACCTGGCCGTGGTCCTGGCCGAGACCGGCAAGGACGTGCTGCTGGTCTCCGCCGACCTGCGCCGGCCCCGGGTCCACCAGTTCTTCAGCCTGCAGAACAAGTCGGGCCTGTCCAACCTGCTCACCGACGGCACCCCGCCCGACAAGCGCAAGGGCCCGGTGGCCGACGGCAAGCAGATGGCCTCCGAGCTGTGGTCGGTCGCCCCCAACCTGTGGGTGGTCCTGTCGGGGCCGCTGCCACCGCACCCGTCGGCGCTGATGGACTCCGACTCGATGCGCCAGTTCCTGAAGGAGCAGCGCGACCTGTTCGACTTCATCGTGCTGGACTGCCCGCCCGCCCTGGTGGTGGCCGACTCCATGGCCCTGGCCCCGCTGGCCGACGCCGTCCTGGTGGTGGCCGACGCCAAGGAGAGCGACCGCGACCGCTCCAAGCAGGCCGGCAAGAGCACCTACTACTACGACACCCAGGACGACTAG
PROTEIN sequence
Length: 518
VSAEPAPSGSVELRDYLRVFRRQLALIVAITLLGAAAAAAYTFRRTPVYESSASVLVRAITTNAFDPGSRVDQQLNMFNQRQLAQSEPVAALAAKTLQTTATPAQLLEHVNVDVPANSQILRVRYQDTVPLTAQRGADAFAKAYLVSREADARAQATTSQKSLQRDIARFQKQASAAEKQIADPDADSATRQAAQAKLAAANNRLDQLLSQLSGFQSLDFTPGTVIAAAGLPASPASPNNRLDVGIGLLVGLFLGVVLAFVRDRTDDRLRGREDLAERLDRPVLATIPPLSKRVRQEGKLRWKRRSRNSLVTLEQPNSPAAEAYRTLRTRMARLASQLDINSVMVVSAGVGEGKSTTAANLAVVLAETGKDVLLVSADLRRPRVHQFFSLQNKSGLSNLLTDGTPPDKRKGPVADGKQMASELWSVAPNLWVVLSGPLPPHPSALMDSDSMRQFLKEQRDLFDFIVLDCPPALVVADSMALAPLADAVLVVADAKESDRDRSKQAGKSTYYYDTQDD*