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PLM3_5_b1_sep16_scaffold_9825_2

Organism: PLM3_5_b1_sep16_Actinobacteridae_Actinomycetales_73_13

near complete RP 41 / 55 MC: 3 BSCG 44 / 51 MC: 5 ASCG 12 / 38 MC: 3
Location: comp(351..2162)

Top 3 Functional Annotations

Value Algorithm Source
UPI0003C7F104 related cluster Tax=unknown RepID=UPI0003C7F104 similarity UNIREF
DB: UNIREF100
  • Identity: 39.8
  • Coverage: 573.0
  • Bit_score: 329
  • Evalue 4.20e-87
Sigma-70 region 2 {ECO:0000313|EMBL:EFQ82806.1}; species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Aeromicrobium.;" source="Aeromicrobium marinum DSM 15272.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 58.4
  • Coverage: 279.0
  • Bit_score: 318
  • Evalue 1.40e-83
putative RNA polymerase ECF subfamily sigma factor similarity KEGG
DB: KEGG
  • Identity: 49.5
  • Coverage: 283.0
  • Bit_score: 253
  • Evalue 1.10e-64

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Taxonomy

Aeromicrobium marinum → Aeromicrobium → Propionibacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1812
ATGGACGTCCGACCTCGTCCCGACGCCCGCGACGACGCCGAGCTCGTTCGGGCGGCGACGGCCGGCGACCGCGGCGCCTTCGCCGCGATCTACGACCGCTACGCCGACCGCCTGCACGACTTCTGCTGGTCGGTGCTGCGCGACCGCGACGAGGCGGCCGACGCCACCCAGGACGCGTTCCTGGTCGCGGCCGAGCGCCTCGGCCAGCTCCGCGACCCGGAGCGTCTCCGTCCCTGGCTGTACGCGGTCGCCCGCAGCCAGGCCCTCCGCCGGGCCAGGGCCCGCTCGCGCCTCGCCCCCGAGGAGGACATGACCGACCTGCCCGACCCCACCACCGGCCCCGAACAGGCCGCCCAGCGCGCCGACCTCCGCGAGCTGGTCTGGAACGCCGCCGCCGGCCTGTCCGAACGCGACCGCGCCCTCCTCGACCTCCACCTCCGCCACGGCCTCGAGGGCGCCGACCTGGGCGAGGCCATCGGCGTCGAGCCCGCCCACGCCTACGTCCTCCTGACCCGCCTCCGCGACCAGGTCGAACGCTCCCTCGGCGCCCTCCTCGTCGCCCGCCTTGGCCGAGCCGACTGCCCCGACCTGTCCCGCCTGCTGACCGACTGGGACGGCCGGTTCTCCCCCCTCGTCCGCAAGCGGGTCGCCCGCCACGTCGACAACTGCGAGACCTGCGGCGCCGCCCGCCGCAAGCTCGCCAGCCCCCTGGCCCTCCTGGCGGCCGTCCCCCCCATGCCAGCCCCAGCCGACCTCAGGGGCCGGGTGCTGGAGCAGTTCCAGCTCGCATCCGCGGGTTCGGGTGGTGCGGGCGACCCAGGCGACCCGGGCGCGGTCCAGCCCCAGGCGGGGACCGCTGGCCCCCCGGAGGGGGAGAGTAGCCGACGCGGCGAGGTTGGGGAGTCCGATATCCACAGCCCCCCTCCAGGGGCGGGTGTGGGCTGGCCGGCGACCGACGAGGCCGGCGCCGGCAAGGGCCGGCGGCGCACGGCGGTGGCTGCGCTCGTCGCGGCGATGTTGCTGAGCGTCGGGGTGGGAGTCGGGCTGGGATGGGAGCGGTCGCCGGCCGAGTCCAGCCCCTCCGACGACCAGGGCGGCGGCCCGGTGGTGGCCGGGGCGGCCACCTCGACCGCCCCGACCTCGACGCCGACAACCGCGGCGCCTTCGACCTCGACCAGCACCTCGACCTCGGTCACGACCAGCACCACGACCCCGCCCCCGGCGGCGCCGCCCTCGCTGACCGTCTCCCCGGCCAGGGTCGATCTCGGCTCCGCCGGCACCAGCGCCACCCTCACGGTCCGCAACGGCGGTGACGAGCCCCTCTCGTGGGCGGCCGCCCCCTCGACGCCCTGGCTGCGGGTGCGCCCGTCCAGCGGCCGCCTCGACGGCGGCGAGCAGGCCAGGCTCAGCCTGTCCGCGACCCGCGACGGCCTGCCCGAAGGCGACGCCGACGCCCGGGTCGAGCTCACCTGGGGCGGCGCCGCCCGCTCGGTCGCCGTCGCCCTGCGGGTCGAGCACCTTCCCGAGATCAGTGACCTGGGGGCCTCGCCGCCCCAGATCGCCGTCGCCCCTTGCGTTCCCACCACCACCCTGGTCGGCGCCACCGTGACCGACGAGTCGGGCCTCTCGTCGGTGACCCTGCGCTGGGGCGGCCAGTCGGTCCCCATGACCCAGCGGTCTGGACGCTGGTTCGCCAGGCTCGGCCCCGTGGCCAGCCCGGGCACGGTGTCCTGGCAGGTCGTCGCCACCGACTCCCGGGGCAACACCGCCTCGGCGTCGGGCCCGCCGGTTCGCGTCCTCGCCTGCCGGTGA
PROTEIN sequence
Length: 604
MDVRPRPDARDDAELVRAATAGDRGAFAAIYDRYADRLHDFCWSVLRDRDEAADATQDAFLVAAERLGQLRDPERLRPWLYAVARSQALRRARARSRLAPEEDMTDLPDPTTGPEQAAQRADLRELVWNAAAGLSERDRALLDLHLRHGLEGADLGEAIGVEPAHAYVLLTRLRDQVERSLGALLVARLGRADCPDLSRLLTDWDGRFSPLVRKRVARHVDNCETCGAARRKLASPLALLAAVPPMPAPADLRGRVLEQFQLASAGSGGAGDPGDPGAVQPQAGTAGPPEGESSRRGEVGESDIHSPPPGAGVGWPATDEAGAGKGRRRTAVAALVAAMLLSVGVGVGLGWERSPAESSPSDDQGGGPVVAGAATSTAPTSTPTTAAPSTSTSTSTSVTTSTTTPPPAAPPSLTVSPARVDLGSAGTSATLTVRNGGDEPLSWAAAPSTPWLRVRPSSGRLDGGEQARLSLSATRDGLPEGDADARVELTWGGAARSVAVALRVEHLPEISDLGASPPQIAVAPCVPTTTLVGATVTDESGLSSVTLRWGGQSVPMTQRSGRWFARLGPVASPGTVSWQVVATDSRGNTASASGPPVRVLACR*