ggKbase home page

PLM3_5_b1_sep16_scaffold_9890_2

Organism: PLM3_5_b1_sep16_Actinobacteridae_Actinomycetales_73_13

near complete RP 41 / 55 MC: 3 BSCG 44 / 51 MC: 5 ASCG 12 / 38 MC: 3
Location: 1468..2148

Top 3 Functional Annotations

Value Algorithm Source
Transposase Tax=Thermaerobacter subterraneus DSM 13965 RepID=K6PRI5_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 61.5
  • Coverage: 195.0
  • Bit_score: 246
  • Evalue 1.80e-62
Transposase {ECO:0000313|EMBL:EKP95542.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Thermaerobacter.;" source="Thermaerobacter subterraneus DSM 13965.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 61.5
  • Coverage: 195.0
  • Bit_score: 246
  • Evalue 2.50e-62
integrase catalytic subunit similarity KEGG
DB: KEGG
  • Identity: 60.2
  • Coverage: 196.0
  • Bit_score: 219
  • Evalue 5.00e-55

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Thermaerobacter subterraneus → Thermaerobacter → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 681
GTGAGCTGCTATCGGCTGATCGAGGCGGAGAAAGCACACCACGGCGTCTCCCGTCTGGCCCGCGTGCTGGGTGTGGCACGCGCCGGCTATTACGCCTGGGCCTCGCGCCCACCGTCGCCCAGGGCACTGGCTGACCAGGCGCTCGTCGGCCAGATCCGCGAGATCCACGCCCGCAGCCGTGGCACCTACGGCGCCCCACGCATCCACGCCGAGTTGCGCCTGGGGCTGGAGGTCCGGGTCGGCCGCAAGCGTGTCGCCAGGCTCATGCGCGCCGGCGGTATCGTCGGCGTCCACCGCCGCCGACCCCACGGGCTCACTCGCCGCGACCCGGCCGCGACACCGGCCCCGGATCTGGTCGCGCGCCAGTTCAGTCCACCAGTTCCCGACCGCTTGTGGGTCGCTGACATCACCCAGCAGCGCACCGGTGAGGGCTGGCTGTACCTCGCCGTGGTCCTGGACGCGTTCTCCCGCCGGATCGTCGGCTGGTCGATGGCCGACCATCTCCGCACCGAGCTGGTCCTGGACGCCCTGGACATGGCCATCACCCAGCGCCAGCCCGCCCCAGGGCTGATCCATCACACCGACAGTGAGTATGTGGGGGCCGGTGCTCCTGGGCTTCCTGACCCGCACAGCGATGGACGCGCGAGGATGCTGGTGCCGGGACGCTCCCAGGCTTCCTGA
PROTEIN sequence
Length: 227
VSCYRLIEAEKAHHGVSRLARVLGVARAGYYAWASRPPSPRALADQALVGQIREIHARSRGTYGAPRIHAELRLGLEVRVGRKRVARLMRAGGIVGVHRRRPHGLTRRDPAATPAPDLVARQFSPPVPDRLWVADITQQRTGEGWLYLAVVLDAFSRRIVGWSMADHLRTELVLDALDMAITQRQPAPGLIHHTDSEYVGAGAPGLPDPHSDGRARMLVPGRSQAS*