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PLM3_5_b1_sep16_scaffold_10324_4

Organism: PLM3_5_b1_sep16_Actinobacteridae_Actinomycetales_73_13

near complete RP 41 / 55 MC: 3 BSCG 44 / 51 MC: 5 ASCG 12 / 38 MC: 3
Location: comp(2838..3413)

Top 3 Functional Annotations

Value Algorithm Source
LuxR family transcriptional regulator Tax=Streptomyces acidiscabies RepID=UPI000287EAA7 similarity UNIREF
DB: UNIREF100
  • Identity: 60.4
  • Coverage: 182.0
  • Bit_score: 206
  • Evalue 2.20e-50
two-component system response regulator similarity KEGG
DB: KEGG
  • Identity: 57.4
  • Coverage: 183.0
  • Bit_score: 200
  • Evalue 2.60e-49
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 80.1
  • Coverage: 191.0
  • Bit_score: 292
  • Evalue 2.50e-76

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Taxonomy

RBG_19FT_COMBO_Actinobacteria_70_19_curated → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 576
GACGTGGTCGTGTGCGCCGAGGCCAGCTCGGCAAGGGAGGCCGTGGCCGTCGCCGCCCAGGCCCTGCCCGACGTCATCGTCATGGACGTCCGCCTGTCCGACGGCTCCGGCATCGAGGCCACCCGCGACATCCGGGCCCAGCGGCCGAAGACCCAGGTGCTGATGCTGACCAGCTTCGCCGACGACGAGGCCCTGTTCGCCTCGATCATGGCCGGCGCCGCCGGGTATGTCCTCAAGCAGATCCACGGCGACGAGCTGGTCCGGGCCATCCGCGCCGTCGGCGCCGGCCAGAACCTCCTCGACCCGGCCGTCACCAAGGGCGTGTTCGACCGCCTCCGCAAGGGCAAGCACCTGCTCATGGACGAGAAGCTGGCCCGCCTCTCCCCCCAGGAGGAGCGCATCCTCGCCCTGGTCGCCGACGGCCTGACCAATGGTCAGATCGGCGAGGAGCTGGGCCTGGCCGAGAAGACGGTCAAGAACTACGTCTCCAGCATCCTGGCCAAGCTCGAGGTCGCCCGCCGCGCCGAAGCCGCCGCCTACCTGGCCCGCCACACCACCCTCCCCGGCAGCAGCTGA
PROTEIN sequence
Length: 192
DVVVCAEASSAREAVAVAAQALPDVIVMDVRLSDGSGIEATRDIRAQRPKTQVLMLTSFADDEALFASIMAGAAGYVLKQIHGDELVRAIRAVGAGQNLLDPAVTKGVFDRLRKGKHLLMDEKLARLSPQEERILALVADGLTNGQIGEELGLAEKTVKNYVSSILAKLEVARRAEAAAYLARHTTLPGSS*