ggKbase home page

PLM3_5_b1_sep16_scaffold_10717_3

Organism: PLM3_5_b1_sep16_Actinobacteridae_Actinomycetales_73_13

near complete RP 41 / 55 MC: 3 BSCG 44 / 51 MC: 5 ASCG 12 / 38 MC: 3
Location: 1538..2830

Top 3 Functional Annotations

Value Algorithm Source
rRNA cytosine-C5-methyltransferase Tax=Actinomadura atramentaria RepID=UPI0003726743 similarity UNIREF
DB: UNIREF100
  • Identity: 47.1
  • Coverage: 454.0
  • Bit_score: 319
  • Evalue 3.10e-84
rRNA methyltransferase {ECO:0000313|EMBL:EHK84700.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus pyridinivorans AK37.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 45.7
  • Coverage: 457.0
  • Bit_score: 312
  • Evalue 9.10e-82
methyltransferase similarity KEGG
DB: KEGG
  • Identity: 45.7
  • Coverage: 455.0
  • Bit_score: 311
  • Evalue 3.10e-82

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhodococcus pyridinivorans → Rhodococcus → Corynebacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1293
GTGACCGCCAGGACGCGGGCGGCGGCCAGCGCCCGGGACGTCGCCCTGGCGGCGCTGGAGCGAGTCGACGACGGGGCCTACGCCAACCTGGTCCTGCCGGCGCTGCTGCGGCGGTCAGAGCTGAACCTGTCGGAGCGGGCCGCCGCCACCGACCTGGTCTACGGGTCGCTGCGGATGCGGGCGGCGCTGGACTTCGCCCTGGCCCCGCTGTCCCGCCAGCCCCTCGACCGGCTGGAGCCGCTGGTCCTGCGGGGCCTGCGCCTGGGCGCCTACGAGCTGCTGTTCGGGGGCACGGCGGCGCATGCGGCCGTGGCCGAGACCGTCGGGGCGGTGGCCAGGGCCGGCCACCGCGGCCAGGCCGGCTACGTCAACGCCGTGCTCCGCCGCCTGGCCGCCGTCCCGCCCACCTGGCCCGACCCGGACCGCGACCCCGCCGGCTGGGCCACCACCCGCGGCTCCCACCCGGCCTGGATCGTCTCCGAGACCCTGGCCCGCCTCGGCCCCCGGGAGATGGTCGCCCTTGTCGAGGCGGACAACACCCGGCCAGAGGTCAGCCTGCGGGTCACCCCCGGACGGACCACCCGCGACCAGCTGCTGGCCGAGCTGGCCGAGGCCGGCGTGCCCGCCCGGCCGAGCCCGCTCAGCCCCGACTGCGTGACCATGGAACGGGGCGACCCGGCCCGCCTGGCCGCCGTCGCCGAGGGCCGGGCGGTGGTCCAGGACGCCGCCTCGGCCCTGGTCGCCCCGGCCGTCGGCGCCGCCCCCGGCGACCTGGTCGCCGACCTGGCCGCCGGGCCGGGGGGCAAGGCCGGCCACCTGGCCGCCCTCGGCGCCCGGGTCCTGGCCGTCGAGGTCAACCGGCGCCGGGCCCGCCTCGTCGCCCAGACGGCGGCCAGGATCGAGGTGGCCGACCGGCTCCACACCGTGGTCGCCGACGGCCGCCGGCCGCCGCTGCGGCCCGGCCAGGCCGACGCCGCCCTGGTCGACGCGCCCTGCACCAACCTGGGCAGCCTTCGCCGCCGCCCCGAGGCGCGCTGGCGCCACGGCCCCGGCGACGTCGCCGGGCTGGTCGAGCTCCAGCTCGACCTGGTCGAGGCGGCCGCCGACGCGGTGCGGCCCGGCGGGACCGTGCTGTACTCGGTCTGCACCTGGACCAGGGCCGAGACCGACGGCGTGGTCGCCGAGCTGCTCGAGCGCCGCGACGACCTGCGGCTGGAGGAGACCCGCCAGCTGTGGCCGCACCGCGACGGGGCCGACGGCATGTTTCTTGCACGGCTGTTCAAGGTAAGGTGA
PROTEIN sequence
Length: 431
VTARTRAAASARDVALAALERVDDGAYANLVLPALLRRSELNLSERAAATDLVYGSLRMRAALDFALAPLSRQPLDRLEPLVLRGLRLGAYELLFGGTAAHAAVAETVGAVARAGHRGQAGYVNAVLRRLAAVPPTWPDPDRDPAGWATTRGSHPAWIVSETLARLGPREMVALVEADNTRPEVSLRVTPGRTTRDQLLAELAEAGVPARPSPLSPDCVTMERGDPARLAAVAEGRAVVQDAASALVAPAVGAAPGDLVADLAAGPGGKAGHLAALGARVLAVEVNRRRARLVAQTAARIEVADRLHTVVADGRRPPLRPGQADAALVDAPCTNLGSLRRRPEARWRHGPGDVAGLVELQLDLVEAAADAVRPGGTVLYSVCTWTRAETDGVVAELLERRDDLRLEETRQLWPHRDGADGMFLARLFKVR*