ggKbase home page

PLM3_5_b1_sep16_scaffold_11150_2

Organism: PLM3_5_b1_sep16_Actinobacteridae_Actinomycetales_73_13

near complete RP 41 / 55 MC: 3 BSCG 44 / 51 MC: 5 ASCG 12 / 38 MC: 3
Location: 889..1719

Top 3 Functional Annotations

Value Algorithm Source
ABC-type transporter, integral membrane subunit Tax=Frankia sp. CN3 RepID=G6H3N2_9ACTO similarity UNIREF
DB: UNIREF100
  • Identity: 78.2
  • Coverage: 275.0
  • Bit_score: 434
  • Evalue 4.30e-119
binding-protein-dependent transport system inner membrane protein similarity KEGG
DB: KEGG
  • Identity: 77.5
  • Coverage: 275.0
  • Bit_score: 432
  • Evalue 6.00e-119
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:ADP82050.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EuI1c).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 77.5
  • Coverage: 275.0
  • Bit_score: 432
  • Evalue 3.00e-118

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Frankia sp. EuI1c → Frankia → Frankiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 831
GTGAGCACTCGAACCGCCGCCAAGGCGTCGTGGGCGGCCGGCAACACCATCGTCGTCGTGGCGGCGCTGATCCCGGTCCTGTGGCTGGCCTCGCTGTCGTTCAAGGACCCAAGCACCATCGCCGACGGCAGCTTCCTGCCGCGGAGATGGACGCTGGCCAACTACCGCGGCATCTTCCAGACCTCGCTGTTCACCCGGGCGCTGGTCAACTCCATCGGCATCGCCCTCATCGCCACCGTCCTGGCCGTGGTGGTCGGCTCGATGGCCGCCTACGCCGTCGCCCGGCTACGCTTCCCGGGCAAGCAGGTGCTGGTCGCGGTGACCCTGCTGATCGCCATGTTCCCGGCCATCTCGCTGGTCAGCCCGCTGTTCAACCTGTGGCGGCAGCTGGGCCTGTTCGACACCTGGCCCGGCCTGATCATCCCCTACCTGACGTTCTCGCTGCCGCTGGCCATCTACACCCTGTCGGCCTTCTTCCGGGAGATCCCCTGGGAGCTGGAGCGGGCCGCCCAGGTCGACGGCGCCACCCCGCTCCAGGCGTTCCTCCAGGTGATCGCGCCGCTCGCCGCCCCGGGCATGGTGACCACCGCGATCCTGGTGTTCATCTTCTGCTGGACCGACTTCGTGTTCGCGATCTCGCTCACCTCGACCAGCGCCTCCCAGACCGTGCCGGCGGCGATCGCGTTCTTCTCCGGGGCCTCGCAGTTCCAGACGCCCATCGGCTCGATCGCCGCCGCCGGCGTGGTGATCACCATCCCGATCATCCTCTTCGTGTTCTTCTTCCAGCGCCGGATCGTGGCCGGGCTGACCTCCGGCGCGGTGAAAGGTTAG
PROTEIN sequence
Length: 277
VSTRTAAKASWAAGNTIVVVAALIPVLWLASLSFKDPSTIADGSFLPRRWTLANYRGIFQTSLFTRALVNSIGIALIATVLAVVVGSMAAYAVARLRFPGKQVLVAVTLLIAMFPAISLVSPLFNLWRQLGLFDTWPGLIIPYLTFSLPLAIYTLSAFFREIPWELERAAQVDGATPLQAFLQVIAPLAAPGMVTTAILVFIFCWTDFVFAISLTSTSASQTVPAAIAFFSGASQFQTPIGSIAAAGVVITIPIILFVFFFQRRIVAGLTSGAVKG*