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PLM3_5_b1_sep16_scaffold_12730_2

Organism: PLM3_5_b1_sep16_Actinobacteridae_Actinomycetales_73_13

near complete RP 41 / 55 MC: 3 BSCG 44 / 51 MC: 5 ASCG 12 / 38 MC: 3
Location: comp(824..1393)

Top 3 Functional Annotations

Value Algorithm Source
Ribosome maturation factor RimM Tax=Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 / NCIMB 10081) RepID=D1AB16_THECD similarity UNIREF
DB: UNIREF100
  • Identity: 49.4
  • Coverage: 174.0
  • Bit_score: 146
  • Evalue 1.60e-32
16S rRNA processing protein RimM similarity KEGG
DB: KEGG
  • Identity: 49.4
  • Coverage: 174.0
  • Bit_score: 146
  • Evalue 4.50e-33
Ribosome maturation factor RimM {ECO:0000256|HAMAP-Rule:MF_00014, ECO:0000256|SAAS:SAAS00006662}; species="Bacteria; Actinobacteria; Streptosporangiales; Thermomonosporaceae; Thermomonospora.;" source="Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 /; NCIMB 10081).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 49.4
  • Coverage: 174.0
  • Bit_score: 146
  • Evalue 2.20e-32

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Taxonomy

Thermomonospora curvata → Thermomonospora → Streptosporangiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 570
GTGCCCGAGTCAGCGGGGCGCCCCTCTCCGGCCCCCGGCACCCCGCCGGACCGCCTGGTCGTCGGCCGGGTGGTCCGGCCCCACGGGGTGCGGGGTGAGCTGTCGGTCGAGGTGCTGTCGGACGCCCCGGAGCGGTTCGCGCCCGGCGCCGAGCTGGGCGTCGGCGACCCCGACGGCCCGGACCCGCTGGGCACGGCGGTCGTCCTGGCCGCCCGCCTCCACCTGGGCCGGCTGCTGCTGAGCCTCGAGGGGGTGGAGGACCGCGACGCCGCCGACCGGCTCCGGGGGGCCTGGCTGTCGATCCCGGCCGCCTCGGCCCGCCCGCTCGACCCGGGCGAGTTCTGGCGCCACCAGCTGGTCGGCCTGGCCGTGGTCGACCACCAGGGCCGCGAGCGGGGCCGGATCGCCGACGTCGTCCCCGGCGCCGCCCACGACCTGCTCTCGGTCGAGCTCCCCGGCGGGGCCAGCGCCCTCGTCCCGGCCGTGGCCGCGCTGGTCACGGTCGAGCTGGACGCGGGCCGGGTCCTGGTCGACGCCGTCCCCGGCCTCCTTCCGGAGGAAGAGGAATAG
PROTEIN sequence
Length: 190
VPESAGRPSPAPGTPPDRLVVGRVVRPHGVRGELSVEVLSDAPERFAPGAELGVGDPDGPDPLGTAVVLAARLHLGRLLLSLEGVEDRDAADRLRGAWLSIPAASARPLDPGEFWRHQLVGLAVVDHQGRERGRIADVVPGAAHDLLSVELPGGASALVPAVAALVTVELDAGRVLVDAVPGLLPEEEE*