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PLM3_5_b1_sep16_scaffold_17100_1

Organism: PLM3_5_b1_sep16_Actinobacteridae_Actinomycetales_73_13

near complete RP 41 / 55 MC: 3 BSCG 44 / 51 MC: 5 ASCG 12 / 38 MC: 3
Location: 708..1385

Top 3 Functional Annotations

Value Algorithm Source
Site-specific recombinase XerD Tax=Thermaerobacter subterraneus DSM 13965 RepID=K6P087_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 43.6
  • Coverage: 204.0
  • Bit_score: 144
  • Evalue 9.40e-32
Site-specific recombinase XerD {ECO:0000313|EMBL:EKP94490.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Thermaerobacter.;" source="Thermaerobacter subterraneus DSM 13965.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 43.6
  • Coverage: 204.0
  • Bit_score: 144
  • Evalue 1.30e-31
integrase family protein similarity KEGG
DB: KEGG
  • Identity: 42.2
  • Coverage: 199.0
  • Bit_score: 142
  • Evalue 1.30e-31

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Taxonomy

Thermaerobacter subterraneus → Thermaerobacter → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 678
ATGCGCTGGCAGCTCGTCGCCCGCAACGCTGCCGCCGACCTGGAGCTGCCGCCGGTCCCCGCGGCACCGATGGTGACCTTGACCCCCGACCAGGCGCGGGTCCTCATGGAGGCGGCCTCCGGGAGCTGGCTGCGGATGCTGGTCCTGCTCGGCCTGGCCACCGGGGCCCGGCTGGGGGAGTTGCTGGCGCTGCGCTGGTCCGACATGGACCTGGACGCCGGCGTCGCTCGCATCAGCCGCTCAGCCCAGGTCGTCGACGGCCAGGTCCGGTTCAAGCAGCCCAAGACCCTCGCCGGCGCCCGGCCGGTCGCGCTCGGGCCGACCATGGTGGCCGCGCTGCGCCGCCACCGCGCCGACCAGCTCCAGCTGCGGCTGGCCTTCGCTAGGGCCTACGTCGACGAGGATCTGGTACTGGCCAAGGCCGATGGAAGCCCGTATCGGCCCGACTCGGTGTCGACCATGTTCCGCAAGCTGGTCGACCGGGCCGGCCTGCCCCGGGAGATCCACGTCCACACCCTGCGCCACTCGGCGGCGAGCTTCCTGGCTGCCGAGGGCGTGCCCGCCTCCGACATCGCGGCCCAGCTCGGCCATGCCGACGGCGGGCCCTGGCGCTCCGGGTCTATGTGCACCCGCTGGAGGAGAACCGGCGCCGCGCCGGCGCGACCCTCGACCGGGTGA
PROTEIN sequence
Length: 226
MRWQLVARNAAADLELPPVPAAPMVTLTPDQARVLMEAASGSWLRMLVLLGLATGARLGELLALRWSDMDLDAGVARISRSAQVVDGQVRFKQPKTLAGARPVALGPTMVAALRRHRADQLQLRLAFARAYVDEDLVLAKADGSPYRPDSVSTMFRKLVDRAGLPREIHVHTLRHSAASFLAAEGVPASDIAAQLGHADGGPWRSGSMCTRWRRTGAAPARPSTG*