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PLM3_5_b1_sep16_scaffold_17696_1

Organism: PLM3_5_b1_sep16_Actinobacteridae_Actinomycetales_73_13

near complete RP 41 / 55 MC: 3 BSCG 44 / 51 MC: 5 ASCG 12 / 38 MC: 3
Location: 3..578

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein Tax=Actinopolymorpha alba RepID=UPI0003751A44 similarity UNIREF
DB: UNIREF100
  • Identity: 67.0
  • Coverage: 188.0
  • Bit_score: 248
  • Evalue 5.10e-63
ECF subfamily RNA polymerase sigma-70 factor similarity KEGG
DB: KEGG
  • Identity: 70.3
  • Coverage: 192.0
  • Bit_score: 240
  • Evalue 3.90e-61
RNA polymerase sigma-70 factor, ECF subfamily protein {ECO:0000313|EMBL:AEK47353.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis mediterranei (strain S699) (Nocardia mediterranei).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 70.3
  • Coverage: 192.0
  • Bit_score: 240
  • Evalue 2.00e-60

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Taxonomy

Amycolatopsis mediterranei → Amycolatopsis → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 576
GACTCGGTCGGCCTCGCCCTCCTGGTCGTGCTCGACACCCTGTCACCGGCGGAGCGGCTCGCCTTCGTGCTCCACGACATGTTCCAGCTGCCCTTCGAGGAGATCGCTCCCATGGTCGGCCGGTCCCCTACGGCGGCCAGGCAGCTCGCCAGCCGGGCACGGCGGCGGGTCAAAGGGGCCGATATCCCGGCCCCCGACCCCGACCTGGCTCGGCAACGCGACGTGGTCGACGCCTTCTTCCTGGCCGCCCGTGGCGGCGACCTCGACGCCCTGGTCGCGCTGCTCGACCCCGACGTCGTGCTGCGAGCCGACTTCGGGGTCAGGCGGCCCGCCGCCTCCCGGGTGGTCCGCGGCGCGGCGGCTGTCGCCAGGCAGGCGGTCCTGGGCGCGCTCCCCGGGGCCGACCTGCACCCCGCGCTGGTCAACGGCGCGGCCGGGGCGGTCGTGACGGTGGGTGGACGGCCGTTCGCGGTGCTGGGGTTCACCGTGGCCGAGGCCAAGATCCTGGAGATCGACGCCATCGCCGACCCCGAACGCGTCCGGAGGGTCGCCGCCGCCGTCCTGGGCGGCGGCTGA
PROTEIN sequence
Length: 192
DSVGLALLVVLDTLSPAERLAFVLHDMFQLPFEEIAPMVGRSPTAARQLASRARRRVKGADIPAPDPDLARQRDVVDAFFLAARGGDLDALVALLDPDVVLRADFGVRRPAASRVVRGAAAVARQAVLGALPGADLHPALVNGAAGAVVTVGGRPFAVLGFTVAEAKILEIDAIADPERVRRVAAAVLGGG*