ggKbase home page

PLM3_5_b1_sep16_scaffold_23540_4

Organism: PLM3_5_b1_sep16_Actinobacteridae_Actinomycetales_73_13

near complete RP 41 / 55 MC: 3 BSCG 44 / 51 MC: 5 ASCG 12 / 38 MC: 3
Location: comp(2548..3120)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, TetR family Tax=Blastococcus saxobsidens (strain DD2) RepID=H6RU22_BLASD similarity UNIREF
DB: UNIREF100
  • Identity: 36.5
  • Coverage: 189.0
  • Bit_score: 97
  • Evalue 8.50e-18
TetR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 36.5
  • Coverage: 189.0
  • Bit_score: 97
  • Evalue 2.40e-18
Tax=RIFCSPHIGHO2_02_FULL_Melainabacteria_34_12_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 31.0
  • Coverage: 187.0
  • Bit_score: 101
  • Evalue 1.10e-18

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_Melainabacteria_34_12 → Melainabacteria → Bacteria

Sequences

DNA sequence
Length: 573
GTGCCAACCGCCATCGACACCAGGGCAAGGCTGCTCGCCGCGGCCCGGCAGGCCTTCGCCGACCTCGGCTACGCCCGGGCCCGGGTCGAGGACATTGTCGCCAGGGCCGGGGTCGGGCACGGCACCTTCTACGCCTACTTCAAGAACAAGCGGGCCGCCCTGGCCGCCCTCATCTCCGAGAACGCCGCCACCCTGGTCGACCTGGCCGGCCAGCCCTGGCGTCCCGGCGACGTCCGGGCCAGCCTGGTCGAGGTCCTGCGGGGCCTCTCCGACCTGTACGAGCGCGACGCCGACCTGATCGCCCTCTGGACCGAGGCCTCGATCCAGGACCCGGAGCTGGGCCGGATCCTCGACGAGGTCCGCCGCCAGTTCGTGGCCCGCATCGCCCGCAACATCGAGCGGGCCGCCAGCCAGGGCGTGACCCGCCCGGTCGACCCCCTGACGGCCGCCACCGCCCTGGCCGCCATGGCCGAGCAGACGATGTTCCTGCGGGCCGTCCGGGGCGAGCCGCTGGACCGCGACCTCACCGTCGAGACCCTGGCCGATCTCTGGCTCCACGCCCTCTACCGCTAG
PROTEIN sequence
Length: 191
VPTAIDTRARLLAAARQAFADLGYARARVEDIVARAGVGHGTFYAYFKNKRAALAALISENAATLVDLAGQPWRPGDVRASLVEVLRGLSDLYERDADLIALWTEASIQDPELGRILDEVRRQFVARIARNIERAASQGVTRPVDPLTAATALAAMAEQTMFLRAVRGEPLDRDLTVETLADLWLHALYR*