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PLM3_5_b1_sep16_scaffold_31727_1

Organism: PLM3_5_b1_sep16_Actinobacteridae_Actinomycetales_73_13

near complete RP 41 / 55 MC: 3 BSCG 44 / 51 MC: 5 ASCG 12 / 38 MC: 3
Location: comp(114..1094)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein Tax=Nocardiopsis gilva RepID=UPI000348B9AB similarity UNIREF
DB: UNIREF100
  • Identity: 49.0
  • Coverage: 298.0
  • Bit_score: 287
  • Evalue 9.90e-75
ATP-dependent DNA ligase {ECO:0000313|EMBL:KDN20967.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis rifamycinica.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 52.5
  • Coverage: 276.0
  • Bit_score: 282
  • Evalue 5.90e-73
ATP-dependent DNA ligase similarity KEGG
DB: KEGG
  • Identity: 51.1
  • Coverage: 276.0
  • Bit_score: 275
  • Evalue 1.40e-71

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Taxonomy

Amycolatopsis rifamycinica → Amycolatopsis → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 981
ATGCCTCGCCTCGTGAGGGACGGGTCGCTGCGGGTCGGCGGCCGCACCGTCCAGGTGACCAGCGTCGGCAAGCCGTTCTTCCCCGACGTCGGCCTGGTCAAGGGCGACCTGCTCGCCTACTACCGCGACGTGGCCGAGGTCATGCTCCCGCACCTGGCCGGCCGGCCCCTCAACCTGCAGCGGTTCCCCAACGGGGTCAACGGCAAGGGGTTCTGGCAGCAGGGCGCCTCCGACCACTTCCCGGACTGGGTCCGCACCGTCACCGTCGAGCGCCGGGGCCGCGGCGGGACCGTCGACCACGTGGTCTGCGAGGACGCCGCCACCATCGTCTACCTGGCCAACCTGTCCACGGTGACCTTCCACGCCTGGACCTCGAGGGTCGAGCACCTGGCCCGGCCCGACCTGGTCATCATCGACCTCGACCCCGACCCCGAGCAGGAGCTGGACGTGGTCCGGGCGGCGGCCAGGGCGGTCAGGAAGGCGTCCGAGGAGGTCGGCCTGACCCCCTTCATCCAGACCTCAGGGTCCAGGGGCTACCACGTGGTCCTGCCCTTGCGGCCCGGCCCCGACGTCGAGGTGGTCAGGGGCCTGGCCGACGAGCTGGCCCTGCTGGTCGCGGCCCGCGACCCCGACCGGCTGAGCGTCGAGTGGCGCAAGGCCAGCCGCCAGGGCCGCCTGCTGCTGGACACCGCCCGCAACGGCTACGCCCAGACGGTGGTCGCCCCCTACTCGGTCCGGCCCAAGCCGGAGGCGCCGGTGGCCACCCCGATCGACTGGCCCGAGCTGGGCCGGGTCGAGCCCCGCACCTACACCGTGACCAACCTGCGCCGCCGGCTGGCCCGCAAGCCCGACCCGTGGGCCGCCATGGCCGCCGAGGCGGCCGAGTTCGACACGGTCCGGGCCCGCCTGGACGAGCTGCTCGCCGAGGCTGGGGGCCCCGGGGGCCCGGAGGATCAAGCAGCCGAAGGCCGAAGGCGCTAG
PROTEIN sequence
Length: 327
MPRLVRDGSLRVGGRTVQVTSVGKPFFPDVGLVKGDLLAYYRDVAEVMLPHLAGRPLNLQRFPNGVNGKGFWQQGASDHFPDWVRTVTVERRGRGGTVDHVVCEDAATIVYLANLSTVTFHAWTSRVEHLARPDLVIIDLDPDPEQELDVVRAAARAVRKASEEVGLTPFIQTSGSRGYHVVLPLRPGPDVEVVRGLADELALLVAARDPDRLSVEWRKASRQGRLLLDTARNGYAQTVVAPYSVRPKPEAPVATPIDWPELGRVEPRTYTVTNLRRRLARKPDPWAAMAAEAAEFDTVRARLDELLAEAGGPGGPEDQAAEGRRR*