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PLM3_5_b1_sep16_scaffold_33800_1

Organism: PLM3_5_b1_sep16_Actinobacteridae_Actinomycetales_73_13

near complete RP 41 / 55 MC: 3 BSCG 44 / 51 MC: 5 ASCG 12 / 38 MC: 3
Location: 3..650

Top 3 Functional Annotations

Value Algorithm Source
transcriptional regulator Tax=Frankia sp. Iso899 RepID=UPI0003B559C6 similarity UNIREF
DB: UNIREF100
  • Identity: 51.9
  • Coverage: 210.0
  • Bit_score: 216
  • Evalue 2.40e-53
GAF domain-containing protein {ECO:0000313|EMBL:KJE24479.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. CpI1-S.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 41.1
  • Coverage: 209.0
  • Bit_score: 157
  • Evalue 1.10e-35
transcriptional activator protein traR similarity KEGG
DB: KEGG
  • Identity: 39.7
  • Coverage: 209.0
  • Bit_score: 152
  • Evalue 7.10e-35

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Taxonomy

Frankia sp. CpI1-S → Frankia → Frankiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 648
TCGTCCCCGGTCACGGTCGAGGAGGCCCTGGAGCGGGTGATGGCGTCGGCCGACGCCCTGTTCGGGGTCGACGGGACGGCCCTGATGCTGGTCGACCGGGACCAGGCGCTGCGCAACCTGGCCGTCTCCGACGCCCGGGCGGGCCTGCTCGAGGAGCTCCAGGAAGAGCACGGGGAGGGCCCGTGCGTCGACGCCTTCGAGGACAAGCAGCCGGTCGCGGCCGACGACCTGGCCACCGACGACCGCTGGCCGGCGTTCGCGCCCGCCGCCGCCGGCGGCGGGCTGGTGGCCGTGCTGGCCAGCCCCATCCCCTACAGCGACCATGCCGTCGGGGTGGTGGCGGTGTTCGCCGGCGACCCCCATCCCTGGACCGAGGCCGAGCGGGAGGCGATCGTCGCCTTCACCGAGCTGGTCGCCCTGCTCATCCTGAACGCCATGGAGGCCTCCGAGCGCGGCAAGCTGGCGGGCGAGCTCCAGCTGGCATTGAGCTCGCGGGTGGTGATCGAGCAGGCCAAGGGGGTGCTGGTCGGGCGGCACGGGCTCACCACCCGCCAGGCCTTCGAGCGGCTGCGCCGCCAGGCCAGGGACCAGCGCCGGCCCCTGTCCGAGGTCGCGCGGGCCGTGGTCAGCGCGGCCGAGCACCGATGA
PROTEIN sequence
Length: 216
SSPVTVEEALERVMASADALFGVDGTALMLVDRDQALRNLAVSDARAGLLEELQEEHGEGPCVDAFEDKQPVAADDLATDDRWPAFAPAAAGGGLVAVLASPIPYSDHAVGVVAVFAGDPHPWTEAEREAIVAFTELVALLILNAMEASERGKLAGELQLALSSRVVIEQAKGVLVGRHGLTTRQAFERLRRQARDQRRPLSEVARAVVSAAEHR*