ggKbase home page

PLM3_30_b1_sep16_scaffold_62_26

Organism: PLM3_30_b1_sep16_Thaumarchaeota_Marine_Group_I_34_13

near complete RP 33 / 55 MC: 2 BSCG 18 / 51 MC: 2 ASCG 38 / 38 MC: 1
Location: comp(26572..26859)

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S26e Tax=Candidatus Nitrososphaera gargensis RepID=K0IB98_NITGG similarity UNIREF
DB: UNIREF100
  • Identity: 83.0
  • Coverage: 94.0
  • Bit_score: 162
  • Evalue 1.80e-37
SSU ribosomal protein S26E similarity KEGG
DB: KEGG
  • Identity: 88.3
  • Coverage: 94.0
  • Bit_score: 168
  • Evalue 5.50e-40
30S ribosomal protein S26e {ECO:0000313|EMBL:AIC14755.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera viennensis EN76.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 88.3
  • Coverage: 94.0
  • Bit_score: 168
  • Evalue 2.70e-39

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Nitrososphaera viennensis → Nitrososphaera → Nitrososphaerales → Nitrososphaeria → Thaumarchaeota → Archaea

Sequences

DNA sequence
Length: 288
ATGCCAAAGAAAAGGACAAGTAGAGGACGAACCAAAGGCGGGAAAGGAAGTTCAGGAACAGTTCATTGTAGTCAGTGCGGGGCCATGGTTCCTAGGGATAAAGCAAAAAAAGTTACGGGTAGAATTACATTAGTAGAACCCACATTGGCAAAGGAATTAGCAGCCCAGGGAGCATATATTGCACGTTCAATGGATGTCAAATTTTATTGTGTCTCTTGCGCTGTGCATAGAGGAATAGTAAAAGTTAGATCAGAATTGGAACGTAGAAGAACAGGAAGGCTTGGATAA
PROTEIN sequence
Length: 96
MPKKRTSRGRTKGGKGSSGTVHCSQCGAMVPRDKAKKVTGRITLVEPTLAKELAAQGAYIARSMDVKFYCVSCAVHRGIVKVRSELERRRTGRLG*