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PLM3_30_b1_sep16_scaffold_17_5

Organism: PLM3_30_b1_sep16_Thaumarchaeota_Marine_Group_I_34_13

near complete RP 33 / 55 MC: 2 BSCG 18 / 51 MC: 2 ASCG 38 / 38 MC: 1
Location: 4884..8708

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase {ECO:0000256|RuleBase:RU004279}; EC=2.7.7.6 {ECO:0000256|RuleBase:RU004279};; Flags: Fragment;; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera gargensis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 83.0
  • Coverage: 1272.0
  • Bit_score: 2159
  • Evalue 0.0
rpoA; DNA-directed RNA polymerase subunit A (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 83.0
  • Coverage: 1272.0
  • Bit_score: 2159
  • Evalue 0.0
DNA-directed RNA polymerase Tax=Candidatus Nitrososphaera gargensis RepID=K0IC33_NITGG similarity UNIREF
DB: UNIREF100
  • Identity: 83.0
  • Coverage: 1272.0
  • Bit_score: 2159
  • Evalue 0.0

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Taxonomy

Candidatus Nitrososphaera gargensis → Nitrososphaera → Nitrososphaerales → Nitrososphaeria → Thaumarchaeota → Archaea

Sequences

DNA sequence
Length: 3825
ATGCAAGTTGAAGATAACCTAAAAATTTTAGGCGCTATTAAATTTAGTGTATTATCTCCTGTCGAAATTCGAAAATTCAGTGTAGTTGAAATCACGGCTCCAGAGACATATGATGAGGATGGCATGTCCGTTCAAGGCGGTCTCATGGACAATAGACTTGGGACACTGGAACCTGGACAGAAATGTGGAACTTGCGGAAACACATCGGCTAACTGTCCGGGACATTTTGGTCATATTGAGCTTGCTGAAGCTGTGTTGCACATTGCTTTTGTAGATGATATACACAAACTGTTGCTTGTATCATGCAGGTCATGTAGTAGGATAAAACTTTCAAATGAAGATTTGGCAAAATTCAGGGAGCTTCGGGATACCAAAGCTGCATATGCAGTAATAACTCTTGAAAATATTAAAGAAGAAATCATAGAAAAAGCAAAAAAAGTAAAGATATGTCCACATTGCCAAAAGGAACAGTACGATCTTGTGTTTACAAAGCCTACGATTTTCGTAGAAAAAACTGAGATAGGTGAAAACAGGCTCCTTCCAATAACAATCAGAGAACGACTGATGAATATTCCAAATGAAGATCTTGTTTTATTGGGATATGATCCCCAGACGGCAAGACCTGAGTGGTTTGTCTTACAAGTCTTACCAGTTCCTCCAGTTACAGTAAGACCATCAATTATCCTGGAAACCGGGATAAGATCCGAAGACGATCTTACCCACAAATTGGTTGATATTATTAGAGTTAATCAAAGACTAAAAGAAAGCAAGGAAGCAGGAACACCGCCACTCATAGTTCAGGACCTAGTTGACCTTCTTCAATATCATGTTACCACTTACTTTGACAATGAAGTTTCTGGAATCCCACAGGCGCATCATAGATCTGGAAGACCATTAAAGACACTGACACAAAGACTAAAAGGAAAAGAAGGACGATTCAGAGGATCGTTATCTGGTAAGAGAGTAGATTTTTCCAGCAGAACAGTAATTTCTCCAGATCCTAATTTGAGCATCTCCGATGTCGGGGTCCCCGTTGATGTGGCAAAAAAACTCACCATCCCAGAAACTGTTAGCGATTGGAACATTGAGGAATTGAAGAAAATGATTATCAATGGACCTAATGATTATCCTGGAGCTAATTACATCATAAGGACTGATGGAGTAAAAATACGACTTGATTATGTTACTGATAGGAATGTACTGGCTGATTCAATTGGTCCTGGTTATGTTGTAGAAAGGCATTTACGAGATGGAGATGCAGTAATCTTCAATAGACAACCCTCTCTGCACAGGATGTCCATAATGGCACATTATGTAAAGGTACTTCCATATAGAACATTTAGGTTACATCCTGCAGTCTGTCCGCCTTATAACGCAGATTTTGATGGAGATGAAATGAACCTTCATGTTCCACAGAGTGAAGAGGCCCGTGCAGAGGCTGCATTACTTATGCGAGTTCAAGATCAACTAATTTCCCCAAGGTATGGTGGACCAATAATTGGTGCAATTAGAGATTTCATAACAGGTGCCTTCATCTTAACACAGGATAAGACATTTTTGAAACAGGAAGAATTCACTAATTTGGCGTTATTGGGAGGTTATTCAGGAACCCTTCCAGAACCAAAACATCTTGAAAATGGTAGAAAAATCTTTACTGGGAAACAACTTTTTTCGCTCTTTCTGCCTAAGGACTTTAATTATGTAATCACTTCTAAATGGAACAAAGCGTCAAAGGGTGAAGGGAAAGATGTTGTAATAAAGAACGGCGAGCTGTTAAGCGGAGTTATTGATAAAGCCTCTATTGGTGCAGAAGAACCAGACAGCGTATTACACAGAATAGTTAAAGATTATGGAAACGCGGCAGCAAAACGATTTTTAGATTCAATACTGATAGTTTTAAAAACATATCTGACACAGAATGGTTTTTCCTATGGTTACTCTGACCTCTGGCTGCCTGATGAAACTAGGAGTGAGATTAGTAATGTTATCCTTAAGGCATATGAGAAAGTATACGAATTAATAAAACAGCACAATGAAGAAACGTTACCATTAACAAGAGGATTATCACCTGCAGAAGCACTAGAACTCTATGTGGTAAATGAACTTTCAAGAGCACGTGATAGAGCCGGCAAAACTGCAGATCGTGCATTTCCCGATGATAATTCCGGTGTTATAATGGCCTCTACAGGAGCAAGGGGTTCAACGTTAAATATTGGACAGATGACAGCTGCACTAGGACAGCAGTCAATTAGAGGCAGAAGAATCACCAAAGGATATAGAGACAGATCACTTCCACATTTCAAACCCAATGATGCCAATCCTGATTCGAAAGGATTCGTAAAATCAAACTATAGGGATGGACTAAGTCCGCTAGAGTTTTTCTTCCATGCAATGGGCGGCCGAGAGGGGCTTGTTGATACTGCTGTAAGGACTCAACAATCTGGTTACATGCAAAGAAGACTAATCAATGCACTTGAACACATGAAGATAGAATATGATCAAACTGTCAGGGACCCCCACGGTAATATCATACAATTTGTTTATGGAGAGGATGGGATAGATCCTGCAAAAAGTGATCATGGTGAAGCAGTGAATATTTCTCGATTGATAGAAAGTGAACTACTCGTAGATGAAGGCAAGAAAGCAACCGAAAAAGAAATTTCCGAAATAGTGACTAAATACGGAAAGAGTATTAATCCAAGACTAAAGGAAAAGTTGTTACTATCAGTAAGTCAAAATAGAATTAGCAAAGATGGTACTAACAAGGTGATAAAGAAAACACTGGATCTTATTAACAAAGCAATGGTAGAACCAGGAGAGGCAGTTGGAGTTGTTACTGCTCAATCTATTGGCGAACCCGGAACTCAGATGACACTTAGGACATTCCATTTTGCAGGAGTTAAGGAAAGAAATGTTACATTAGGACTACCAAGATTGATTGAACTTGTCGATGCAAGAAAAAAACCTGTTACGCCAACTATGGATGTATATTTGGATGAAGAACATCGAGTCTCAAGGGAGAAAGCTCTTAATGTTGCGAGAGACATAATATTTACAAAGGTTGCAGATTTAATTGAAAGAAGCGAAACTGATTATTCTGGAGTAATAACATTTCATATTTCTGAATCAAAGTTATCTGAACGTGGTTGTTCAATTGAAGATATTATGGAAGTACTAAAAGGGCCGAAGAAAAAATATGATGTTACTTTACAAGAATCCAAGAAAATTATAAAAATTTCTATTGCAGGAGAACCTGATGCACAAACGCTACTCACAATGAAGAACAAACTATTGAATGCAAGAGTTAAAGGTGTGCAGGATATAGAACGGGTAACAATAGTAAAGCAAAATGAAGAATGGGTCATTCAAACTGCAGGTTCGAATTTATCAAAGATTATAGCGATAGATGGTATCGATACTTCGAGAATAACGACAAATAATGTTTATGAAGTTTGGCAGACTTTAGGAATCGAAGCTGCAAGAAATGCATTGATTAAGGAAATAACCAATACACTTGAGGAACAGGGATTAGAAGTTGATATGAGACATATTATGTTAGTTGCTGATCTTATGACTTCAAAAGGACATTTGCAACAAATAGGAAGACATGGAATTGCGGGTACAAAAACTTCTGTATTGGCAAGAGCTGCATTTGAAATAACTGTACCTACTATTGCAAAAGCATCTTTGGAAGGACAGGTTGAATCTCTAAAAGGCGTAACAGAAAACGTTATAGTAGGCGCTACAGTACCTATTGGTACTGGTATGGTCGATCTATACATGAGTGTGAAAGATGAAAATGAAAAATCTCGAAAAAAGAATTAA
PROTEIN sequence
Length: 1275
MQVEDNLKILGAIKFSVLSPVEIRKFSVVEITAPETYDEDGMSVQGGLMDNRLGTLEPGQKCGTCGNTSANCPGHFGHIELAEAVLHIAFVDDIHKLLLVSCRSCSRIKLSNEDLAKFRELRDTKAAYAVITLENIKEEIIEKAKKVKICPHCQKEQYDLVFTKPTIFVEKTEIGENRLLPITIRERLMNIPNEDLVLLGYDPQTARPEWFVLQVLPVPPVTVRPSIILETGIRSEDDLTHKLVDIIRVNQRLKESKEAGTPPLIVQDLVDLLQYHVTTYFDNEVSGIPQAHHRSGRPLKTLTQRLKGKEGRFRGSLSGKRVDFSSRTVISPDPNLSISDVGVPVDVAKKLTIPETVSDWNIEELKKMIINGPNDYPGANYIIRTDGVKIRLDYVTDRNVLADSIGPGYVVERHLRDGDAVIFNRQPSLHRMSIMAHYVKVLPYRTFRLHPAVCPPYNADFDGDEMNLHVPQSEEARAEAALLMRVQDQLISPRYGGPIIGAIRDFITGAFILTQDKTFLKQEEFTNLALLGGYSGTLPEPKHLENGRKIFTGKQLFSLFLPKDFNYVITSKWNKASKGEGKDVVIKNGELLSGVIDKASIGAEEPDSVLHRIVKDYGNAAAKRFLDSILIVLKTYLTQNGFSYGYSDLWLPDETRSEISNVILKAYEKVYELIKQHNEETLPLTRGLSPAEALELYVVNELSRARDRAGKTADRAFPDDNSGVIMASTGARGSTLNIGQMTAALGQQSIRGRRITKGYRDRSLPHFKPNDANPDSKGFVKSNYRDGLSPLEFFFHAMGGREGLVDTAVRTQQSGYMQRRLINALEHMKIEYDQTVRDPHGNIIQFVYGEDGIDPAKSDHGEAVNISRLIESELLVDEGKKATEKEISEIVTKYGKSINPRLKEKLLLSVSQNRISKDGTNKVIKKTLDLINKAMVEPGEAVGVVTAQSIGEPGTQMTLRTFHFAGVKERNVTLGLPRLIELVDARKKPVTPTMDVYLDEEHRVSREKALNVARDIIFTKVADLIERSETDYSGVITFHISESKLSERGCSIEDIMEVLKGPKKKYDVTLQESKKIIKISIAGEPDAQTLLTMKNKLLNARVKGVQDIERVTIVKQNEEWVIQTAGSNLSKIIAIDGIDTSRITTNNVYEVWQTLGIEAARNALIKEITNTLEEQGLEVDMRHIMLVADLMTSKGHLQQIGRHGIAGTKTSVLARAAFEITVPTIAKASLEGQVESLKGVTENVIVGATVPIGTGMVDLYMSVKDENEKSRKKN*