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PLM3_30_b1_sep16_scaffold_33112_3

Organism: PLM3_30_b1_sep16_Alphaproteobacteria_Rhizobiales_66_8

near complete RP 48 / 55 MC: 2 BSCG 44 / 51 MC: 3 ASCG 8 / 38 MC: 1
Location: comp(2366..2971)

Top 3 Functional Annotations

Value Algorithm Source
3-isopropylmalate dehydratase small subunit {ECO:0000256|HAMAP-Rule:MF_01031}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01031};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01031}; Isopropylmalate isomerase {ECO:0000256|HAMAP-Rule:MF_01031}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 82.6
  • Coverage: 201.0
  • Bit_score: 357
  • Evalue 6.80e-96
leuD; isopropylmalate isomerase small subunit (EC:4.2.1.33) similarity KEGG
DB: KEGG
  • Identity: 82.1
  • Coverage: 201.0
  • Bit_score: 356
  • Evalue 4.00e-96
3-isopropylmalate dehydratase small subunit Tax=Bradyrhizobium RepID=H0RW21_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 84.1
  • Coverage: 201.0
  • Bit_score: 357
  • Evalue 6.30e-96

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Taxonomy

Rhodopseudomonas palustris → Rhodopseudomonas → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 606
ATGGACAAGTTCACCAAGCTCGAAGGCGTCGCGGCACCGCTGCGGATGGTCAATATCGACACCGATATGATCATCCCGAAGAACTACCTGAAGACAATCAAGCGCACCGGGCTCGGCAAGGGCCTGTTCGCCGAGAAGCGCTTCAAGGACGACGGCAGCGAGAATCCGGACTTCGTGCTCAACAAGCCGGCTTATCGCAACGCCAAGATCATCGTGGCGGACGATAATTTCGGCTGCGGCTCGAGCCGCGAGCACGCGCCTTGGGCGCTGCTCGACTTCGGCATCCGCTGCGTGATCTCGACCTCGTTCGGCGACATTTTCTACAACAACTGTTTCAAGAACGGCATTCTGCCGATCAAGGTCTCGCCGGAGGACCTCGAGAAGCTGTTCGACGATGCCGAGCGTGGCGCCAATGCGACGCTCTCGGTCGATCTGGCGGCGCAGGAAATCCGTGGGCCGGACGGCGGCGTGGTCAAGTTCGAGATCGACCAGTTCCGCAAGCACTGCCTGCTCAACGGCCTCGACGATGTCGGCCTGACCATGGTCAAGAAAGACAAGATCGCCTCCTACGAAGACAGGGCGAAAGTCGCGCGCCCTTGGGCGTGA
PROTEIN sequence
Length: 202
MDKFTKLEGVAAPLRMVNIDTDMIIPKNYLKTIKRTGLGKGLFAEKRFKDDGSENPDFVLNKPAYRNAKIIVADDNFGCGSSREHAPWALLDFGIRCVISTSFGDIFYNNCFKNGILPIKVSPEDLEKLFDDAERGANATLSVDLAAQEIRGPDGGVVKFEIDQFRKHCLLNGLDDVGLTMVKKDKIASYEDRAKVARPWA*