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PLM3_30_b1_sep16_scaffold_4155_3

Organism: PLM3_30_b1_sep16_Bacteroidetes_Sphingobacteriia_43_6

near complete RP 48 / 55 MC: 4 BSCG 49 / 51 MC: 5 ASCG 12 / 38 MC: 1
Location: 3010..4500

Top 3 Functional Annotations

Value Algorithm Source
RNA-splicing ligase RtcB {ECO:0000256|RuleBase:RU371113}; EC=6.5.1.- {ECO:0000256|RuleBase:RU371113};; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 68.2
  • Coverage: 497.0
  • Bit_score: 679
  • Evalue 2.50e-192
RNA-splicing ligase RtcB Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TK26_NIAKG similarity UNIREF
DB: UNIREF100
  • Identity: 68.2
  • Coverage: 497.0
  • Bit_score: 679
  • Evalue 1.80e-192
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 68.2
  • Coverage: 497.0
  • Bit_score: 679
  • Evalue 5.00e-193

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Taxonomy

Niastella koreensis → Niastella → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1491
ATGGCAAAACTTAAATTAAGAGGAAAGGATCTAATAAGCCTCGGATACCCACAGTCGCCTGTGATCAGCGTTGCTATGAACATCATGGAAAAGAATTTCAAGCACCTGGCAGAAGCTGATGCATTGGAAGTGTTGAGGTCAGTGCTTCAAAGCCCAAATGAATATGCAAATGATCCTGTGTTAGGTAAGATTGCAGAATGTCTTTTACCTAAGCCAGTGATAGAGGGTGCTGAAATTTCATTGAATAATACAGGAATACATTTTAATGTATTCGGTTCCGAGTTCATTGAACCTGGGGCCATGAACCAAATGTACCAGGCAGCAAAATTGCCGATTTCCGTTGCAGGGGCATTGATGCCGGATGCGCATGCAGGTTATGGATTACCCATTGGAGGAGTATTGGCAACGGAGAATACCATCATTCCTTATGGCGTAGGTGTTGACATCGGATGCAGAATGAGCCTGTCCATTTTCGATATCGATCCCAAGGAATTGATCCAGCGGGAGCAATTCTTCACCAGGGAATTAAATGAAGCCACGCTTTTTGGCGGGGGAAAGCAGTTTGACCAGAGTACCTCTCATGAAGTGATGGATAGAAAATTGTTCGACGAAATTGCACTGCTGAAAGGTTTGCAATCGAGAGCAGCAAAGCAATTGGGGTCTTCGGGTTCGGGAAATCATTTTGTAGAATTTGGGACTGTGGAAATCCTTGAAGAGTTTGACGTCTCGACTCCGCTCGACGTCAAACGCAACGGCCCCTCGACTTCGCTCGGGGTTGCGCCGGGAAAATACCTTGGACTGTTGTCACATTCCGGCTCAAGGGCACTGGGTGCAAATATCGCTAACCATTATACGAAGATCGCGAAGCAGAAGAGGAGATTGCCCGGTGAAGCTTCTAACCTGGCCTGGTTGCACCTTGCCGAAGAGGAAGGTTGGGAGTATTGGCTGGCTATGAACCTGGCAGGTGACTATGCCTCCGCCTGTCATCACGTGATCCATCAGAAAATTGCAAAGCAGTTAGGGAGAAAGCCGCTGCAGATGGTGGAGAACCATCACAATTTTGCATGGAAGGAAATTCATGAAGGGAAAGAATTGATTGTGCATCGCAAAGGCGCAACACCCGCAGGCAAGGATGTTCTTGGCATCATTCCCGGTTCCATGACTGCACCCGGCTTTATTGTAAAAGGAAAAGGAGAGAGCGCATCATTGGATTCAGCTTCGCATGGAGCAGGCAGAAAGATGAGCAGAACTGCTGCATTGAAATCTGTCACCCATAAGTTGCTCAATGATGAATTGGAAAAGCATGGAGTGAGGTTGATTGGGGGCGGACTTGATGAAGCGCCATTTGCGTATAAGGACATTCACAAAGTGATGAATGCGCAAAAGCAATTGGTAGAAACAATAGGACTATTCTATCCTAAAATTGTGAAGATGGATGGGGCTGCTCCCAAACAATGGAGGAAGAATAAAGACGAGATTTTAGGGGAATGA
PROTEIN sequence
Length: 497
MAKLKLRGKDLISLGYPQSPVISVAMNIMEKNFKHLAEADALEVLRSVLQSPNEYANDPVLGKIAECLLPKPVIEGAEISLNNTGIHFNVFGSEFIEPGAMNQMYQAAKLPISVAGALMPDAHAGYGLPIGGVLATENTIIPYGVGVDIGCRMSLSIFDIDPKELIQREQFFTRELNEATLFGGGKQFDQSTSHEVMDRKLFDEIALLKGLQSRAAKQLGSSGSGNHFVEFGTVEILEEFDVSTPLDVKRNGPSTSLGVAPGKYLGLLSHSGSRALGANIANHYTKIAKQKRRLPGEASNLAWLHLAEEEGWEYWLAMNLAGDYASACHHVIHQKIAKQLGRKPLQMVENHHNFAWKEIHEGKELIVHRKGATPAGKDVLGIIPGSMTAPGFIVKGKGESASLDSASHGAGRKMSRTAALKSVTHKLLNDELEKHGVRLIGGGLDEAPFAYKDIHKVMNAQKQLVETIGLFYPKIVKMDGAAPKQWRKNKDEILGE*