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PLM3_30_b2_sep16_scaffold_1581_6

Organism: PLM3_30_b2_sep16_Verrucomicrobia_Verrucomicrobiales_62_7

near complete RP 51 / 55 MC: 3 BSCG 48 / 51 ASCG 13 / 38
Location: 3853..4407

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily Tax=Pedosphaera parvula Ellin514 RepID=B9XGS8_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 56.0
  • Coverage: 182.0
  • Bit_score: 208
  • Evalue 3.30e-51
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:EEF60849.1}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 56.0
  • Coverage: 182.0
  • Bit_score: 208
  • Evalue 4.60e-51
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 37.7
  • Coverage: 175.0
  • Bit_score: 99
  • Evalue 6.10e-19

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Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 555
ATGAGCGACCCAGCATCCAGATTGTGTGAACTCGCCCGGAACGGCGATCGCGAGGCGGCCGGCGAACTTGTCTCGCTGTTTTACGAACGGCTCTACGCCTGGCTGCGTCGCCTGACGGGCAACGAGGACGACGCCGCGGACCTCACGCAAAAAACCTTCGCCCGCGCATGGGTTGCGCTGGCTTCGTGGCAAGGCCGTTCGAGCTTTTCCACGTGGCTGCACGGCATCGGGCATCACGTTTATGTGGACTGGCGCCGCGCCCAACCGCCCGCCGCCCTGCCGCTGGACGACTGGTGGACGCATTGCCCGGACGACGCGCCGGACCCATTCGAGAAGGCGGCCGGGCGCGACCTGGCGGAGCGGCTGTTCGCGCACGTCGAACGGCTCGATGAGGACACCCGCCAGACCGTCCATCTACACTACTACCAGGGCCTCTCGCTGGCCGAGACAGCCGAAGTCCTCGACGTCGCCACCAGCACGGTGAAGTACCGGCTGCGACAGGCGCTGGATTTCCTGAAGACGCGCTTCGCTGAGCCGAAGACGCACGTCCGGTAA
PROTEIN sequence
Length: 185
MSDPASRLCELARNGDREAAGELVSLFYERLYAWLRRLTGNEDDAADLTQKTFARAWVALASWQGRSSFSTWLHGIGHHVYVDWRRAQPPAALPLDDWWTHCPDDAPDPFEKAAGRDLAERLFAHVERLDEDTRQTVHLHYYQGLSLAETAEVLDVATSTVKYRLRQALDFLKTRFAEPKTHVR*