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PLM3_30_b2_sep16_scaffold_1430_5

Organism: PLM3_30_b2_sep16_Verrucomicrobia_Verrucomicrobiales_62_7

near complete RP 51 / 55 MC: 3 BSCG 48 / 51 ASCG 13 / 38
Location: 3001..3687

Top 3 Functional Annotations

Value Algorithm Source
Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunit Tax=Pedosphaera parvula Ellin514 RepID=B9XI75_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 64.9
  • Coverage: 225.0
  • Bit_score: 320
  • Evalue 1.30e-84
Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunit {ECO:0000313|EMBL:EEF60568.1}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 64.9
  • Coverage: 225.0
  • Bit_score: 320
  • Evalue 1.80e-84
gcd1; nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunit similarity KEGG
DB: KEGG
  • Identity: 52.5
  • Coverage: 221.0
  • Bit_score: 240
  • Evalue 2.80e-61

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Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 687
ATGTTCAAGCCGAAGGACCTGTTCGATTTGGCGCAGTCGGAGCATGCCGCGATTTTCGATGGCTGCCAGTTCGCCTGGGAGGCGTTGAGGAAGATCAAGGACCACCTCAAGGCGCGCCTCAAGCCCGCCCTGCACAACCGCTGCGAAGGCGATGTATTCGTCGGTACCGAGGTGTTCATCGGCGAAGGGACCTTGGTCGAGTACGGCGCGATGATCAAAGGCCCGGCCATCATCGGCCGCAACTGCCGCATTCGCCATAACGCCTACATCCGTGAAGACGTGCTCATCGGCGACGACTGCGTGATCGGCAACTCGAGCGAGTTGAAGAACGCGCTGCTCTTCAACGGCTGCCAGGTGCCGCACTTCAACTACGTGGGCGATTCCATTCTCGGGCACAGGGTGCACCTCGGGGCGGGAGTGGTGCTGTCGAACTTCAAGGCGTTTCCTGGCAACGTGACCGTCGAGTTGGACGGCAAGCCGTTCGACACGGGACTGCGCAAGTTCGGCGCGCTGCTGGGCGACGGCGCCGACGTGGGCTGCAACGCCGTGCTCAACCCCGGCAGCATCATCGGCCGTGGCGCGGTGATTTATCCGTGCGTGAACTGGCGCGGCTTCCTGGCGGCGCAAATGATTGCCAAGAATAAGGCGACGGTCGAAGTCGTGGCGCGGGAAGCTGGCACTGCCTAA
PROTEIN sequence
Length: 229
MFKPKDLFDLAQSEHAAIFDGCQFAWEALRKIKDHLKARLKPALHNRCEGDVFVGTEVFIGEGTLVEYGAMIKGPAIIGRNCRIRHNAYIREDVLIGDDCVIGNSSELKNALLFNGCQVPHFNYVGDSILGHRVHLGAGVVLSNFKAFPGNVTVELDGKPFDTGLRKFGALLGDGADVGCNAVLNPGSIIGRGAVIYPCVNWRGFLAAQMIAKNKATVEVVAREAGTA*