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PLM3_30_b2_sep16_scaffold_27_21

Organism: PLM3_30_b2_sep16_Verrucomicrobia_Verrucomicrobiales_62_7

near complete RP 51 / 55 MC: 3 BSCG 48 / 51 ASCG 13 / 38
Location: 25984..26652

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily Tax=Pedosphaera parvula Ellin514 RepID=B9XS45_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 71.8
  • Coverage: 216.0
  • Bit_score: 304
  • Evalue 5.30e-80
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:EEF57341.1}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 71.8
  • Coverage: 216.0
  • Bit_score: 304
  • Evalue 7.50e-80
RNA polymerase subunit sigma-24 similarity KEGG
DB: KEGG
  • Identity: 49.0
  • Coverage: 192.0
  • Bit_score: 188
  • Evalue 1.60e-45

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Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 669
ATGAGCCAACCCGCCCGATTGGAAGCGCCCGAAGTGGCCGACGAAGCCACAGTCGATGCGCCGCCGTGTCCTGCGCCGGTTGAGTCCTCGCCCGATTCGGAGGCAGCGGACCTCGTTCTGGTCCAGCGCGCCCAACAGGGCGACATGCCGGCCTACGATGAACTGGTGCGCAGGTATCAGGAGCGGGTATACGCGACCATCTACCACATGACAGGCAACCACGAGGACGCGGGCGACCTGGCGCAGGAAACGTTCATCAAGGGTTACGCGGCGCTGAAGACGTTCAAGGGCGATTCGAGCTTTTACACCTGGGTCTATCGCATCGCCGTCAACAAGACGATCAACTTCGTCAAGCAGCGCAAGAACAAGTCCCACTTAAGCCTGAACGGCTTCGACTTCCACGCCGAGCACGATCCCGGGATGGTCAATCTGGTCTCGGACAAGACCCCGCGGCGCGAGGCCGGGCTGACCGAACTGCAGGAGCAATTGAACGCCGCGATGCAGAAGCTTTCGCCGGTCCACCGTCTCGTCGTCGCCTTGCACGACGTGCAAGGGCTGCCCCACGAAGAAATCGCCACCATCATGGACTGCAATATCGGTACCGTGCGTTCCCGGCTCTTCTACGCCCGCCAGCAGTTACAGGCCCTCCTGTCCGACTATTTGAAATGA
PROTEIN sequence
Length: 223
MSQPARLEAPEVADEATVDAPPCPAPVESSPDSEAADLVLVQRAQQGDMPAYDELVRRYQERVYATIYHMTGNHEDAGDLAQETFIKGYAALKTFKGDSSFYTWVYRIAVNKTINFVKQRKNKSHLSLNGFDFHAEHDPGMVNLVSDKTPRREAGLTELQEQLNAAMQKLSPVHRLVVALHDVQGLPHEEIATIMDCNIGTVRSRLFYARQQLQALLSDYLK*