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PLM3_30_b2_sep16_scaffold_1378_7

Organism: PLM3_30_b2_sep16_Verrucomicrobia_Verrucomicrobiales_62_7

near complete RP 51 / 55 MC: 3 BSCG 48 / 51 ASCG 13 / 38
Location: 5558..6115

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily Tax=Chthoniobacter flavus Ellin428 RepID=B4D1N8_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 61.3
  • Coverage: 186.0
  • Bit_score: 218
  • Evalue 4.20e-54
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:EDY19650.1}; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 61.3
  • Coverage: 186.0
  • Bit_score: 218
  • Evalue 5.90e-54
ECF subfamily RNA polymerase sigma-24 factor similarity KEGG
DB: KEGG
  • Identity: 39.9
  • Coverage: 183.0
  • Bit_score: 130
  • Evalue 3.30e-28

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Taxonomy

Chthoniobacter flavus → Chthoniobacter → Spartobacteria → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 558
ATGACCGTGGTCCCGCCCGATGCTCCCAGCGCCGGCCCGCCGCGATGCGAATCCATCGAGGCGCTGTTCGCGGCCCTCGAATCGCCGCTGCTCAGTTATGCGCTGCGTCTGCTCGGGGACCGCGCGCTCGCCGAAGACGCCGTCCAGGATGCTTTCATGAAGTTGCACGAACATTTCGCCGAAGTGCGGGAGCCGCGACGCTGGCTCTACCGCACCGTGCATAACCAGGCGCTGAACCACCGGCGCCAGGCCGGCAAAATCGTGCCCCTCGAACAGCCGGCCGACGACGCCCCGCACGCCGCCAACGACACCGCCGACCCCCAGCCCCTGCCCGACGAACAAATCGCCCGCTGGGAAGGCGTCGGGCTGGTGCGTTTGAGCCTCGAAACCCTCGACCCGCGCAGCCGCGAAGTCGTGCGCCTCAAATTCGAGGAAAACCTTTCCTACAAGGAAATCGCCGAGCGCACCGGGCTGAAAGGCGGGCACGTCGGTTACCTCCTCCACCACGCCTTGAAATCCATCGCCGCCGAACTGGCCAAGTCCGGCATCGTGCCATGA
PROTEIN sequence
Length: 186
MTVVPPDAPSAGPPRCESIEALFAALESPLLSYALRLLGDRALAEDAVQDAFMKLHEHFAEVREPRRWLYRTVHNQALNHRRQAGKIVPLEQPADDAPHAANDTADPQPLPDEQIARWEGVGLVRLSLETLDPRSREVVRLKFEENLSYKEIAERTGLKGGHVGYLLHHALKSIAAELAKSGIVP*