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PLM3_30_b2_sep16_scaffold_2073_1

Organism: PLM3_30_b2_sep16_Verrucomicrobia_Verrucomicrobiales_62_7

near complete RP 51 / 55 MC: 3 BSCG 48 / 51 ASCG 13 / 38
Location: 1..765

Top 3 Functional Annotations

Value Algorithm Source
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridylate synthase I {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA-uridine isomerase I {ECO:0000256|HAMAP-Rule:MF_00171}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 68.3
  • Coverage: 243.0
  • Bit_score: 354
  • Evalue 1.20e-94
tRNA pseudouridine synthase A Tax=Pedosphaera parvula Ellin514 RepID=B9XDA1_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 68.3
  • Coverage: 243.0
  • Bit_score: 354
  • Evalue 8.80e-95
tRNA pseudouridine synthase A similarity KEGG
DB: KEGG
  • Identity: 49.6
  • Coverage: 240.0
  • Bit_score: 214
  • Evalue 1.80e-53

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Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 765
GCCTACGACGGCACGGCCTACCAGGGATGGCAAATACAGAAAGTGGGCGCCGGCGTTCAACAGAAGGTGGAGCAGGCGGTGGCCAGGCTCTTCCCATCCGTGAAACGCGTCTACAGCTCGAGCCGCACGGATACGGGCGTCCACGCGCTCGGCATGGTGGCGGACCTGGAGGTGCCCCGGGCCGAGTTCCGGATGCCGCTGCGCAAGGCGGCGTTGGCGTTGAACGCATTTCTGCCGGAGGACATCCGCGTTGTCTCGGCGCAACGCGTGCCGGCGGGCTTCGACGCGCGATTCGACGCCAGTGGCAAGCAGTACCGATACTTCGTATGGAACCGCCCTGTGATGAACCCCCTGCTCCGGACGCACGCCTGGCACGTCCCGACGAAGCTTGACGTGGCCGCAATGCGCGCCGCGGCCAGGCGCCTGCTGGGCCGGCACGATTTCCGTTCCTTTGCGGCAACTCACACCTACGAAATCAAAGACACGGTGCGGACGCTCACGCGCTGCGACATTCGCCGCAGCGGTCCCCTGCTGACGTTCATCCTCGAAGGGGATGGATTCCTCTACAAGATGTGCCGCGGCATTGTCGGCACGCTCGTGCAACTTGGCCGCGGCCGATGGACGGAGGCGGACTTGAATCGGATGCTCGCCGCGAAGGATCGCCGCGTGGCCGGCGTGACCGCGCCTGCGCGGGGACTGGTGTTGTGGCGCGTGTTTTATCGAAAGCGTGAAGCACGAGATGAAAACGTAAAACGTGAAACGTAA
PROTEIN sequence
Length: 255
AYDGTAYQGWQIQKVGAGVQQKVEQAVARLFPSVKRVYSSSRTDTGVHALGMVADLEVPRAEFRMPLRKAALALNAFLPEDIRVVSAQRVPAGFDARFDASGKQYRYFVWNRPVMNPLLRTHAWHVPTKLDVAAMRAAARRLLGRHDFRSFAATHTYEIKDTVRTLTRCDIRRSGPLLTFILEGDGFLYKMCRGIVGTLVQLGRGRWTEADLNRMLAAKDRRVAGVTAPARGLVLWRVFYRKREARDENVKRET*