ggKbase home page

PLM3_30_b2_sep16_scaffold_866_5

Organism: PLM3_30_b2_sep16_Verrucomicrobia_Verrucomicrobiales_62_7

near complete RP 51 / 55 MC: 3 BSCG 48 / 51 ASCG 13 / 38
Location: 4764..7286

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily Tax=Pedosphaera parvula Ellin514 RepID=B9XBI2_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 62.3
  • Coverage: 247.0
  • Bit_score: 292
  • Evalue 1.40e-75
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:EEF62867.1}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 62.3
  • Coverage: 247.0
  • Bit_score: 292
  • Evalue 1.90e-75
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 35.1
  • Coverage: 393.0
  • Bit_score: 186
  • Evalue 3.00e-44

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 2523
ATGAGCGACAGCGACCTGGAACTGCTCGCCCGCTACGCCCGGCACCGCGCTGAGGACGCCTTCGCGGAAGTGGTTCGCCGCCACGTTGACCTCGTTTATTCGGCCGCCCGGCGCCAGGTGCGCGCGCCGGAACTGGCGGAGGAAGTGGCGCAGGCTGTCTTTGCCGACCTTGCCCGGCAGGCCCATCAGCTTCCGCCAGAAACTGTGCTCGCTGCCTGGCTTTACCAGGTCACCCGGCGTACGGCCATCGACGTCGTCCGACGCGAAGCCAGCCGCCGCCTGCGCGAGCGTGTCGCGCACGAACTCCACGCCATGAACGCCACCGCCGAAGACTGGACGCACATCGAGCCGCTCCTGGATGACGCCATGCAAGCGCTCGACGAAACCGACCGCGCCGCCGTCCTGCTGCGCTATTTCGAAAACAAGCCATTGCGAGAAGTCGGGCAAGCACTTGGCACCAGCGACGACGCGGCGCAGAAGCGTGTGAGCCGCGCCGTCGAGCGCCTGCGCGAGTTCTTCGCCAAACGCGGCGTCAGCGTCGGAGTGAGCGGCCTGGTCGCCCTCGTCTCCGCACAGGCGGTTCAAGCCGCCCCCGCTGGATTTAGCTCGGCCGTGACCGCCGCCGCGTTGGTCGAAACATTCACGTCATCGGCCGGAACCCTGGCCGCAGCCAAAGCGAGTGTGTTGACAAAGTGGCAACTCGCCGTGCTGGCCGTCACGTTCGCCGGTGTTATCACCGTGCCGTTGCTTAGGTGGCTGCCGGCGAAGGAATCCGCGCCTGCTGCGAGCACAACGAACCCTCGGCCCGGAATCACAGATCCAACCGTAGCCGCGAATACTGTGAGCCCTACGAACGCGGCGGCCGTGAGCTCGATGGAAGTCAACTCCGCCACGATGGCCCGGACGGAACCGCTCGCTGGCACCGCACTCTTCACGCTGCATACACCACCGGGCGCCGTGGCTATTCAGGCGGATGGAAAAATTCTAGCCGCAACGTTGGGAGGATGGTTCGTCGATGAAGCGTCGGGAACACTGGGTTGGTACTCTCGCGGGGCGATGCGCTTCGAGCCGGACGGCACCTTGGATCGAAGCTTCTTCTGCGATGTGGGCCGGCCGGGCTCGGTCAACCCGATGATCGCGAACCTGAGCGTCGCGCGAGATGGGCGTGTTTTCGTATCCGGCAGCTTTGGTAGCGTCGACGGCCAGCCGCGCCCGGGTTACGCGTTATTGCGCCCGGATGGCCGCCTGGATGACTCGTTCGTGCCGTGGCGAGGCTGGACCAACCTTCCGGGCCCGACGTTCATGCCGGGCGGCACATATTCGGCGGCGCTCCTGGAGGATGGTTCCGTGGCGATTATGAGCGGCTCAGTCGAGGGCAAGCGCGCGCCACATCCGCTGACGGCCTACCGGCTCGACCCGACGGGCCGCTGGACTCAACCTGCGCTGACCCATTCTCCCCCCGCCGACTGGGGTTATCCGCCGGGGCTGATTCAGACTCTCGGCTGGGGCGGGTTCTGGGCGCGGCGCGCGGTGGACTGGACGCGCGAGGTGGAACTGCCCCGCAACTATTGGCATCCACGGGGCAGCGAACGACCGCCAGTCACCGACATCGCATTCGAATTGTGGACGGGCACGCCGACTGCGTTGCAGGCCGCCGAAGTGTTTCGCTCGCTATTCGAGGAAGTGCCGATGGAACTCTGCCGTTACGCGGTGCGCTTGCCATACGGCGAAATTCTTCTTCCCGTTCGGGAAGGCGGTATTCGCGGAAGGTTCATGGTATTTGATGAAGCCTGGCGGCCTCGTCCCGGTTTTACGAACGACTACGAGGCCGCCACCACGAGTTGTATGAAGCTCAAGCGCCTCAAGGACGGCAAGCTGCTGGTCGCCGGTTTGGTGGGTAAGATGAACGGAGAGGCGTTCAGTGGTGTGGTTCGCCTGGAATCGGACGGAGCCATCGATCACGACTTCCGGTGCGGAACCAGCCACGACGAATTCGGTCGCGTGCTGGATTTCGCGGTTCAAGAGGATGGGCGCATCGTCATCTGCGGCTATTTCACGAGTGTCAACGGTGTTGCCTGTCAGCATTTGGCACGCCTCAATCCTGACGGCTCGCTCGATCCGTCGTTTCGGCTGCCCTTCCGTCCGCTGGAGGAAGTGCAGCGCCAGCGATTCCTGCGCATCGCGCGGCTCGCCAAAAAGAAGGATGCGGCCTTGCCGACGGCGACAGCGAACAACACAACAGCCCAGGCGGACGCGACGGCGGCGGCAGCAAACGAGAGAACCGCAGACGGTCCGCCAGAGACCGTGATGATCCTCTCCCTGGCAAAAGAGAACGGAGGAATGGCCATCCAATTCACCGGCTTGCCCGCCCAGCTGTTCATCCTGCAAGCCCACGAATCCATGAGCCGCAGCGAATGGACCAACGTCAGCACCAACCGCACCGCCGCCAGCGGCGTCGGCGTGCTCCGCGATCCGGATTCGGAAAATTATCCGACGCGCTTTTACCGCATCGCCCGCCCTTGA
PROTEIN sequence
Length: 841
MSDSDLELLARYARHRAEDAFAEVVRRHVDLVYSAARRQVRAPELAEEVAQAVFADLARQAHQLPPETVLAAWLYQVTRRTAIDVVRREASRRLRERVAHELHAMNATAEDWTHIEPLLDDAMQALDETDRAAVLLRYFENKPLREVGQALGTSDDAAQKRVSRAVERLREFFAKRGVSVGVSGLVALVSAQAVQAAPAGFSSAVTAAALVETFTSSAGTLAAAKASVLTKWQLAVLAVTFAGVITVPLLRWLPAKESAPAASTTNPRPGITDPTVAANTVSPTNAAAVSSMEVNSATMARTEPLAGTALFTLHTPPGAVAIQADGKILAATLGGWFVDEASGTLGWYSRGAMRFEPDGTLDRSFFCDVGRPGSVNPMIANLSVARDGRVFVSGSFGSVDGQPRPGYALLRPDGRLDDSFVPWRGWTNLPGPTFMPGGTYSAALLEDGSVAIMSGSVEGKRAPHPLTAYRLDPTGRWTQPALTHSPPADWGYPPGLIQTLGWGGFWARRAVDWTREVELPRNYWHPRGSERPPVTDIAFELWTGTPTALQAAEVFRSLFEEVPMELCRYAVRLPYGEILLPVREGGIRGRFMVFDEAWRPRPGFTNDYEAATTSCMKLKRLKDGKLLVAGLVGKMNGEAFSGVVRLESDGAIDHDFRCGTSHDEFGRVLDFAVQEDGRIVICGYFTSVNGVACQHLARLNPDGSLDPSFRLPFRPLEEVQRQRFLRIARLAKKKDAALPTATANNTTAQADATAAAANERTADGPPETVMILSLAKENGGMAIQFTGLPAQLFILQAHESMSRSEWTNVSTNRTAASGVGVLRDPDSENYPTRFYRIARP*