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PLM3_30_b2_sep16_scaffold_955_2

Organism: PLM3_30_b2_sep16_Verrucomicrobia_Verrucomicrobiales_62_7

near complete RP 51 / 55 MC: 3 BSCG 48 / 51 ASCG 13 / 38
Location: comp(424..2859)

Top 3 Functional Annotations

Value Algorithm Source
Type II and III secretion system protein Tax=Pedosphaera parvula Ellin514 RepID=B9XM19_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 43.2
  • Coverage: 815.0
  • Bit_score: 540
  • Evalue 1.60e-150
Type II and III secretion system protein {ECO:0000313|EMBL:EEF59147.1}; Flags: Precursor;; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 43.2
  • Coverage: 815.0
  • Bit_score: 540
  • Evalue 2.30e-150
general secretion pathway protein D similarity KEGG
DB: KEGG
  • Identity: 27.4
  • Coverage: 656.0
  • Bit_score: 188
  • Evalue 5.80e-45

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Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 2436
GTGAAAACCATCCGCCTACTCCTCGCCCTGACGCTCGCCGCGATCGGGCTGAACGCCACCCGCGCCGCCGCGCAAGCGCCGGCTGCGCCCGCCGTACCTAACCCTGAGCTGATCGCCCGTGAAAAGGCGGCAGCCGAGGCCGCCCGCGCGGCCGCCGCCGCCGCGGCCACCAATCCCCCGGGCCGCACGCTGCCGCGCCCGATCAACCCGCCGGCGACGATCGCGACTCCCACCGCTCCGGGCACCGCCCCCGCGACGCCACCGGGGCCCGGCGCCACTCAACCTGCGCCTGCCTTCCCTGCGTTCCCCTCGCCTGCCGTGCCCGGCTTGCCTCCGAACACAAACCGGCCCGGCATCCGCTTCCAGCCCAATAATCCGGCGGGCGCACCTGCCGTCCCGGCTCCCGGCCCCGGGGCCATCGCTCCAGGGACCGCTGGCGCCGTCGCGCCTGGAGTTGCCGCAGCTGCCGGCGCCAACACGAATCTGACGACGGCGCAACTTCGCGCTGCCTCCACCAACGCAGCCGCCGAGGAAGTGTATCCGCCCGGCCTCATCAAGTTTTCCGAGGCCGACCTCGGCCAGGTCCTCGACATCTACCAGGAATTGATCGGGCGCACCCTGCTCAAGGCTGGCGCGCTTCCGCCCGCGAAAATCACGGTCAAGAGCCAGACACCGCTGACGCGCAGCGAGGCCATCAACATGCTGGACACGATCCTCGCGATGAACCAAATCGCGACCACGATCCAGGGGACCAAGTTCATCAAAGTCGTGCCCGCCCCGCAGGCCGCCCAGGAGGCTGAAAAGTTCAACGACATCCCGTGGGAATTGCTTCCCGAAGCCGCGAAGATCGTCACGCACATCGTCCAGTTGAAGAACGCGTTGCCGAACGACGTGCAGCAGGTCATCCAGCCCTTTGCCAAACTGCCGCAAAGCATCATCACCGTTCCCAGCACCAGCATGCTCGTGCTGCGCGACTACGCCGAAAACGTCAAACGCATGCTCGAGATGATTGAGAAGGTCGACGTGGTGCCCGTCCAGGAATTCATCGACGTCGTCATCCCGATCAAATACGCGCTCGTCACGGACATCGCCAATGCGATAGGGCAGCTTACGCAGGGGGGCGGCGGCGTGGCCGGCTCCATTGGCCAACAACAATCCAGGACCGGCCTTTCGACCGGCGGCGGCGGCTTTGGCGCCGGCCGTAGCGGATTAGGGGGCGGATTCGGCGGCACCGGCTATCCAGGCCAACCGGGTTACAATCCCGTCACTCCCTACTCAACGCCGGGCACTGTCGGGGGCAGCGCATACGGCGCGGGCGGCGGGGCGGGTCGCAGTTCTTTCGCCCAACGCCTGAATCAAATCGTCAATCGAGCCGCCGGCAGCGGCGGCGGAGGTGACATCTTCGTGCTTGGCCAAACCAAGATTATCCCCGACGAGCGAACCAACTCACTGCTCATCTTCGCCAGCAGGCAGGACCTCGTCACCATCTCGAACATCATTGAGAAGCTCGATGTTGTGCTCGCCCAAGTGGTGATCGAAGCCGCCGTCATTGAGGTAAACCTGAACAACAACCTCGACTTCGGCTTCAATTACATCCAAACCCATCCTACCACGGTCGGCGATGTCTTCACCGGCGGCGGCGCCATCAGGACCATCCCCTTCCTGAACCTCGGCAGCATCTTCGGCGGCAATAGCGGCTCCAACTCGATTGGCGACGGCTTCACTTACGCCGCCAGGTTCATGAACTTTGACGCCGCCGTCACGGCCATTGCCGGCGACGGCCGCGGGAAGATCCTTCAACGGCCCCGCATCCAGACTTCGCACGCCGTCGAGGCCAATCTCTTCGTCGGCCAGTCCCGCCCCTATCCCTCCAGCTACAGCGGTGGCGGCGGCCTTTACGGCGCCTACAACCAGATCCAGCAACTCCAAATCGGCGTCACGCTCACCGTACTGCCGCTCGTCAATTACGACGGCATGGTCGTGATGGACATCCGGCAGAAGGTTGAGAGCTACGACGGCGACGTGGACATCGCCAACGTCGGCAAGGTGCCCATCACCAGCCAGAAGGAAGCTAACGCCAAGGTGGCCGTCCGCGACCGTGAAACCGTCATGCTGGGAGGCTTCATCTCCAACCAGAAGAACAAAACCCACGGCGGCGTGCCCATCCTCAAGGACATTCCGGGGCTCGGCTTCTTCTTCCGCAGCACCAAGGAGACGGAAGACCGCCGCGAGTTGATCGTGCTCATCCGCCCCACCGTGCTCCCAACGCCCGACCAGGCTGCCGCCTTCGCCAAACAGGAGCGCGCACGGCTGCCCGGCACCAAGGAAGCCGAGTACGACTTCAACGAGTCGGAGCGCAGGCTGCTTCAGGAAACAGACAAGCGGATTGAGAAAAAGTCCATGGACATCTACAAACGCGAAGGCTTTACACGCTAA
PROTEIN sequence
Length: 812
VKTIRLLLALTLAAIGLNATRAAAQAPAAPAVPNPELIAREKAAAEAARAAAAAAATNPPGRTLPRPINPPATIATPTAPGTAPATPPGPGATQPAPAFPAFPSPAVPGLPPNTNRPGIRFQPNNPAGAPAVPAPGPGAIAPGTAGAVAPGVAAAAGANTNLTTAQLRAASTNAAAEEVYPPGLIKFSEADLGQVLDIYQELIGRTLLKAGALPPAKITVKSQTPLTRSEAINMLDTILAMNQIATTIQGTKFIKVVPAPQAAQEAEKFNDIPWELLPEAAKIVTHIVQLKNALPNDVQQVIQPFAKLPQSIITVPSTSMLVLRDYAENVKRMLEMIEKVDVVPVQEFIDVVIPIKYALVTDIANAIGQLTQGGGGVAGSIGQQQSRTGLSTGGGGFGAGRSGLGGGFGGTGYPGQPGYNPVTPYSTPGTVGGSAYGAGGGAGRSSFAQRLNQIVNRAAGSGGGGDIFVLGQTKIIPDERTNSLLIFASRQDLVTISNIIEKLDVVLAQVVIEAAVIEVNLNNNLDFGFNYIQTHPTTVGDVFTGGGAIRTIPFLNLGSIFGGNSGSNSIGDGFTYAARFMNFDAAVTAIAGDGRGKILQRPRIQTSHAVEANLFVGQSRPYPSSYSGGGGLYGAYNQIQQLQIGVTLTVLPLVNYDGMVVMDIRQKVESYDGDVDIANVGKVPITSQKEANAKVAVRDRETVMLGGFISNQKNKTHGGVPILKDIPGLGFFFRSTKETEDRRELIVLIRPTVLPTPDQAAAFAKQERARLPGTKEAEYDFNESERRLLQETDKRIEKKSMDIYKREGFTR*