ggKbase home page

PLM3_30_b2_sep16_scaffold_955_5

Organism: PLM3_30_b2_sep16_Verrucomicrobia_Verrucomicrobiales_62_7

near complete RP 51 / 55 MC: 3 BSCG 48 / 51 ASCG 13 / 38
Location: comp(4763..6514)

Top 3 Functional Annotations

Value Algorithm Source
Fimbrial assembly family protein Tax=Pedosphaera parvula Ellin514 RepID=B9XM21_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 46.6
  • Coverage: 476.0
  • Bit_score: 438
  • Evalue 8.10e-120
Fimbrial assembly family protein {ECO:0000313|EMBL:EEF59149.1}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 46.6
  • Coverage: 476.0
  • Bit_score: 438
  • Evalue 1.10e-119

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 1752
ATGGCCCCCTGGGCGGAATGGGTTCACTGGATCGCCGGCTGGTGGTTGCTTTGCGGGAACACGCTGTCGCTGCTTTTCTACAGCGTGCCGCTGGCGTGGGTCGCAACACAGCACTGGAGCAAGGAGGCGCCGAAGGGTGAGTTGGTCTTCGTCTACATCATGGTTGGGTATGGCCCGCTGCTCGGGAACCTGATCGGATTATGGCTGGGGAACCATTTTGTCCGGCTTCCTGGGAAAAGGCGCAGGAAGGCCGAGCAGTTCGCCGCGACTGGTGAAGCATCTCCCGCTCCCGGCCCGGTCCGACCTACGGGCGGCGCGACCCCCTCCCGACGCCAGGGCTCCACTCGCTGGAGTGCTTGCAACGTGCTCCTGCCGGGCTCGCAAATCCGGCAGCTCTGGCAGTTCAACGCGGGCGGCAACAAGTTCAACCTCGCGCGCTCCGAATCCAAGCTCCCTAGCGAACCGCTTCCGGAAAAGCTCGTCGGCAAGGACTGGCAGACCGTTTTCCAGCCCCGCCTGAACATCGCGTGGCTGTCGGCGGAACGAGTGTTCCTCCGCGTCGTCCAGTTGCCCAAGGCCGACGCCGGCGAGACTCACTCGATGCTCGAGTTGCAGCTCGAAAAACTCTCGCCGCTGCCTGTCAACCAGGTCGTCTGGGGCTACGAAGTCTTTCCTTACGTCGCGCGCGGTGGCGCCAGCGACCACCTCAACCCGCATGCCGCCGGCGAACAACAAACCGTCGTCGTCATCATGGTCGCCCGGAACCACGTTGAGGAATTCCTGGGCCAGCTCGAGTCGCAGGGTTACGTCGCCGACCGGCTCGAGCTGCCGTTGCTAGACGAACTGCGCTCGACGCAGGTCCGTGACAACGGCGCCTGGGTTTTCCCCGGCATCGGCGGCAACCCCGGCGCCTGCATGGTGGCCTGGTGGTACGACGGGGTCCTGCAAAACCTGACCCTGCTCAATATGCCGGCCGGTGAGGCCCGCGCCCCCGCGCTGCGCGAACAGCTCGCGCAAACCGCCTGGGCCGGCGAGATGGAAGGCTGGATGACGAGCGACCCGCGCTACCACCTCGTGGCCGACGAGGCGACCGCCGCCGCGTGGCTTCCGAACTTCGATCCGAATGCGACCGTCGAAGTCGTCCTGCCGCCCGCTCCCCAGGCGCTGGCCTCCATGACCGCCCGGCGCGTCGCCACGACCGCCGCGACCACGAACCTGCTCCCGCCCGAATACGCCAAACGTTACAAGCAACAGTTCGTCGACCGGCTCTGGATGCGTTCGTTGGGAGCGGTGCTGCTGCTCTACATCTTCGGCGTCGTCATCTACATCGGCTTTGTGCAGTTCGCGTCGTACCGCTTCGACAGCACTCAGACTGAGGCCCGCGGCCTAAGCCTCGAATACACGAACACGATTACCCTCAAGGAAAAGCTCCGCGTACTCCAGGAGACGCTTGAATTGCAGTACGCGGCGCTCGAATGTTACAAGGCCGTCTCGGATACCATGCCGGCCGAGTTGACGCTTGATTCCATGCGATTTGAGCGCGGCCGGGAAGTGACGTACTTCGGCTCGGCAGCCGATGCCCAGGACCGCAGCAAAGTCATCGAGTTCAATGAGGCGCTTCTCAAGGTGGAGTACAACGGCCAACCGCTGTTCAGCAAGGTCGCCCTGGGGCGTATGGACAACAAACCCGGCGGCGCGGGGTTAACATGGAGTCTGGTTGGTAGCCTCAAGCGCAGCGACACCACCGAATGA
PROTEIN sequence
Length: 584
MAPWAEWVHWIAGWWLLCGNTLSLLFYSVPLAWVATQHWSKEAPKGELVFVYIMVGYGPLLGNLIGLWLGNHFVRLPGKRRRKAEQFAATGEASPAPGPVRPTGGATPSRRQGSTRWSACNVLLPGSQIRQLWQFNAGGNKFNLARSESKLPSEPLPEKLVGKDWQTVFQPRLNIAWLSAERVFLRVVQLPKADAGETHSMLELQLEKLSPLPVNQVVWGYEVFPYVARGGASDHLNPHAAGEQQTVVVIMVARNHVEEFLGQLESQGYVADRLELPLLDELRSTQVRDNGAWVFPGIGGNPGACMVAWWYDGVLQNLTLLNMPAGEARAPALREQLAQTAWAGEMEGWMTSDPRYHLVADEATAAAWLPNFDPNATVEVVLPPAPQALASMTARRVATTAATTNLLPPEYAKRYKQQFVDRLWMRSLGAVLLLYIFGVVIYIGFVQFASYRFDSTQTEARGLSLEYTNTITLKEKLRVLQETLELQYAALECYKAVSDTMPAELTLDSMRFERGREVTYFGSAADAQDRSKVIEFNEALLKVEYNGQPLFSKVALGRMDNKPGGAGLTWSLVGSLKRSDTTE*