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PLM3_30_b2_sep16_scaffold_986_8

Organism: PLM3_30_b2_sep16_Verrucomicrobia_Verrucomicrobiales_62_7

near complete RP 51 / 55 MC: 3 BSCG 48 / 51 ASCG 13 / 38
Location: 9541..10137

Top 3 Functional Annotations

Value Algorithm Source
DNA-binding protein Tax=Verrucomicrobium spinosum RepID=UPI00017445FA similarity UNIREF
DB: UNIREF100
  • Identity: 76.9
  • Coverage: 186.0
  • Bit_score: 288
  • Evalue 2.70e-75
Transcriptional regulator, XRE family {ECO:0000313|EMBL:EEF57862.1}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 74.7
  • Coverage: 186.0
  • Bit_score: 280
  • Evalue 1.40e-72
helix-turn-helix domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 64.5
  • Coverage: 186.0
  • Bit_score: 231
  • Evalue 1.50e-58

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Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 597
ATGAAAACCCGACACCGAACCGACACCGGCAATGGCCCCGCCGACACGATTAACCGCCACCTGGGCCGCCGCGTAAAGCAGCTCCGCGCCGGCCGCGGCTGGTCGCTTGAGGCGCTGGCCAGCGCCAGCGGGGTGAGCCGCTCGATGTTGAGCCAGATCGAGCGCGAGCAGGCCAATCCGACGCTTGCCGTCACGCTGCGCATCGCGCAGGCCTTCGGCATGACGCTCGGGGAACTGCTGCAGGCGCCGGGCGCCTCCTCCTCCGTATCCGTCATCCGCGCTGAAGACCGCGCCTACCATTATCGATCGGACAAGAACTGCCGCGTGCGCACGCTTTCGCCACTGAACCTGGAGAAGGACGTGGAGCTGTACGAAGTGCAGCTTCAACCCGGCGGCGCGTTGCGCAGCGCGCCGCACTTCGAGGGCACCCGCGAGTTCCTCACGGTGCAGAAGGGCCGCGTGCGCGTGGAATCGGCCGGCGACTCCGAGTTACTGCAGCCAGGCGACTCGGCCAGCTACCGGGCCGACGTGCCGCACGCCATTGTGAACGCGGGCCGCAGCGAAGCGGTGATTTTTCTGGTGGATATTTACCGCTAA
PROTEIN sequence
Length: 199
MKTRHRTDTGNGPADTINRHLGRRVKQLRAGRGWSLEALASASGVSRSMLSQIEREQANPTLAVTLRIAQAFGMTLGELLQAPGASSSVSVIRAEDRAYHYRSDKNCRVRTLSPLNLEKDVELYEVQLQPGGALRSAPHFEGTREFLTVQKGRVRVESAGDSELLQPGDSASYRADVPHAIVNAGRSEAVIFLVDIYR*