ggKbase home page

PLM3_30_b2_sep16_scaffold_1186_2

Organism: PLM3_30_b2_sep16_Verrucomicrobia_Verrucomicrobiales_62_7

near complete RP 51 / 55 MC: 3 BSCG 48 / 51 ASCG 13 / 38
Location: comp(300..794)

Top 3 Functional Annotations

Value Algorithm Source
Response regulator receiver protein Tax=Pedosphaera parvula Ellin514 RepID=B9XL80_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 53.7
  • Coverage: 123.0
  • Bit_score: 140
  • Evalue 1.30e-30
Response regulator receiver protein {ECO:0000313|EMBL:EEF59431.1}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 53.7
  • Coverage: 123.0
  • Bit_score: 140
  • Evalue 1.80e-30
two component, sigma54 specific, Fis family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 43.3
  • Coverage: 120.0
  • Bit_score: 87
  • Evalue 3.70e-15

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 495
ATGACAAAGAGAATTCTTCTGGTGGACGATGAACGCTCCATCCGTGAGTCTCTGAGCAAAATCCTGGGAGCGGAGAATCATGAAGTCGTGCTGGCAGAAAACGGCCAGGAAGCGATCGAGAAATACGGCGCCAAGCGCATCGACCTCTTGATTTTGGACCTCAACATGCCGGTCAAGAACGGCTGGGACACCTTGGAGTGGTTGGCCGAGGTCAATCCGCTGTTGCCCGTCATGATCATCACGGGCCGTCCAAACCAGCGTGCCTTGGCTGAAACAGCGGGTGCGGATGCCCTCATGGAGAAACCGCTCGACGTTCCGCTACTGCTTAAAACGGTTCGCGAGTTGCTGGACGAGCCGCCGGAGAGCCGCGCCCAACGCGCGCGGAGCCGCGCCTCCGGTTTTCGGTACGTGTCCCGCGACATCGACCCATTCCGTGGAATGTTGCTCGAACGCTTCACCACTCCCTACCCATGGCCGGGATCCAGGGACACATGA
PROTEIN sequence
Length: 165
MTKRILLVDDERSIRESLSKILGAENHEVVLAENGQEAIEKYGAKRIDLLILDLNMPVKNGWDTLEWLAEVNPLLPVMIITGRPNQRALAETAGADALMEKPLDVPLLLKTVRELLDEPPESRAQRARSRASGFRYVSRDIDPFRGMLLERFTTPYPWPGSRDT*