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PLM3_30_b2_sep16_scaffold_3020_3

Organism: PLM3_30_b2_sep16_Verrucomicrobia_Verrucomicrobiales_62_7

near complete RP 51 / 55 MC: 3 BSCG 48 / 51 ASCG 13 / 38
Location: 2457..2816

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily Tax=Pedosphaera parvula Ellin514 RepID=B9XC57_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 61.5
  • Coverage: 117.0
  • Bit_score: 147
  • Evalue 5.90e-33
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:EEF62525.1}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 61.5
  • Coverage: 117.0
  • Bit_score: 147
  • Evalue 8.20e-33
ECF subfamily RNA polymerase sigma-24 factor similarity KEGG
DB: KEGG
  • Identity: 46.7
  • Coverage: 105.0
  • Bit_score: 105
  • Evalue 9.40e-21

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Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 360
ATGGTTAAAGCTTGGTTGTTTACAACCTTGCACCGGGAATTCCTGAAAGTCCGCAAGAGGGCGGTGCGTTTTCCGCATATCGAATTGAGCGACGCAACTGAGGATCTGCCGAACGTCTCTCCTGAGATGGTTGACACGCTCGACGGAGCCCGCCTGCTCGAGCTCCTCCGGCGGGTCCAGGAACCATACCTGGCGGCGCTCAGCCTCTTTTATCTGGAAGACTATTCGTACAAAGCAATCGCGGATATCCTCGAAATCCCGCTCGGCACTGTTCGGTCCCGTATTTCCCGCGGCCTTGCGCAACTCCAGCAATTAATCCTAATGGGAAGACGGACAACTGTCACTGCCGGCAAAGCATGA
PROTEIN sequence
Length: 120
MVKAWLFTTLHREFLKVRKRAVRFPHIELSDATEDLPNVSPEMVDTLDGARLLELLRRVQEPYLAALSLFYLEDYSYKAIADILEIPLGTVRSRISRGLAQLQQLILMGRRTTVTAGKA*