ggKbase home page

PLM3_30_b2_sep16_scaffold_5871_9

Organism: PLM3_30_b2_sep16_Verrucomicrobia_Verrucomicrobiales_62_7

near complete RP 51 / 55 MC: 3 BSCG 48 / 51 ASCG 13 / 38
Location: comp(7949..9181)

Top 3 Functional Annotations

Value Algorithm Source
Type II secretion system protein Tax=Pedosphaera parvula Ellin514 RepID=B9XQY8_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 76.4
  • Coverage: 407.0
  • Bit_score: 600
  • Evalue 8.70e-169
Type II secretion system protein {ECO:0000313|EMBL:EEF57765.1}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 76.4
  • Coverage: 407.0
  • Bit_score: 600
  • Evalue 1.20e-168
pilC; type IV pilus inner membrane protein PilC similarity KEGG
DB: KEGG
  • Identity: 43.4
  • Coverage: 412.0
  • Bit_score: 332
  • Evalue 1.30e-88

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 1233
ATGCCGTCATTCACTTACGTCGCGCGGGAAGCCGGGAGCGGACGGGAAATCCGCAACTCGATGGATGCTCAGAACGAACAGGCGGCCATCGCCGCGCTGCTCGGGCGTAACCTGCTCGTCTTGTCAATTGCGGAGAAGGTCGGCAAGAAGGGCAAGACCGCTGGCGGTTCGGTGGCGCTGGCCGACCTGGTGATTTTTACGCGGCAGCTCGCGACGATGATCGACGCCGGTCTTGCCATGGTGCAATCGCTCCAGGCGCTGGCCGAGCAAACGGCCAACAAGGTCATGCGGGACACCATCAAGGACGTCTGCACTCGCGTCGAAGGCGGCGACAGCTTTTCCGAAGCGCTCGTCAAACACCCGAAAGTGTTCAACAAGCTCTTCGTGTGCATGGTCGCCGCCGGCGAACGGGGCGGCTTGCTCGCCGAAATTCTGGCCCGCCTGGCGACCTACCTTGAGAATACCGCCAGGCTCCGCAAGAAGGTGAAATCGGCGATGATGTATCCGACGGCGATGATGTATCCGACGGCCGTCACCATCGTGGCCATTGGCATCACCATTTTCCTGCTCGTCAAAGTCGTCCCTGTGTTCGGCGAAGTCTACAAGAGCTTTGGCTCCAAGCTACCGGGACCGACGCAATTCCTCATCAACATCAGCAACCTCGTCAAACAGTACCTCATCTACCTGCTGGCGCTGGCCATCGGCATCGGCTACGGGTGGTTTGCATGGATCAAGACCAAGAAGGGCCGCGAATTCTGGGACCGCACGCGGATCAAGCTGCCGATCTTTGGACATATCGCGCACAAGATCTGCCTGGCCCGATTCACGCGCACACTGGCGTCACTCATCCGCTCCGGCGTGCCGATTCTGGAGGTGCTCCAAATCGTTTCCAACACCGTCGGCAACGTGATCATGGAGAAAGCAGTGCGCACGGCGGCCAGCGACATCGAACGGGGCGAGGGCATCTCGGTGGCGCTGGGCAAGCACCCCGTCTTCCCGCCGATGATCATCCGCATGATTACCGCCGGCGAACAGACCGGCAAAATCGAGAACATGCTCGAACGCATCTCGGACTTCCTGGACGATGAAATCGAGACGACCCTCTCGGGACTTACTTCCCTCATCGAGCCGCTGCTCATCGTGTTCCTCGGCGTGACGGTCGGCGGCATCGCGATCTGCATGTTCCTGCCGATCTTCAAGATGAGCGAAATCATCAATCCGACGGGCCGGTGA
PROTEIN sequence
Length: 411
MPSFTYVAREAGSGREIRNSMDAQNEQAAIAALLGRNLLVLSIAEKVGKKGKTAGGSVALADLVIFTRQLATMIDAGLAMVQSLQALAEQTANKVMRDTIKDVCTRVEGGDSFSEALVKHPKVFNKLFVCMVAAGERGGLLAEILARLATYLENTARLRKKVKSAMMYPTAMMYPTAVTIVAIGITIFLLVKVVPVFGEVYKSFGSKLPGPTQFLINISNLVKQYLIYLLALAIGIGYGWFAWIKTKKGREFWDRTRIKLPIFGHIAHKICLARFTRTLASLIRSGVPILEVLQIVSNTVGNVIMEKAVRTAASDIERGEGISVALGKHPVFPPMIIRMITAGEQTGKIENMLERISDFLDDEIETTLSGLTSLIEPLLIVFLGVTVGGIAICMFLPIFKMSEIINPTGR*