ggKbase home page

PLM3_30_b2_sep16_scaffold_5873_1

Organism: PLM3_30_b2_sep16_Verrucomicrobia_Verrucomicrobiales_62_7

near complete RP 51 / 55 MC: 3 BSCG 48 / 51 ASCG 13 / 38
Location: 3..545

Top 3 Functional Annotations

Value Algorithm Source
Release factor H-coupled RctB family protein Tax=Pedosphaera parvula Ellin514 RepID=B9XDR4_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 53.7
  • Coverage: 177.0
  • Bit_score: 184
  • Evalue 6.50e-44
Release factor H-coupled RctB family protein {ECO:0000313|EMBL:EEF62210.1}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 53.7
  • Coverage: 177.0
  • Bit_score: 184
  • Evalue 9.20e-44
release factor H-coupled RctB family protein similarity KEGG
DB: KEGG
  • Identity: 51.6
  • Coverage: 186.0
  • Bit_score: 173
  • Evalue 3.30e-41

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 543
AGCATCACGCCCGTCGCTTCTCCCTCTCCGCTGAACCGCGGTAGGGACGCGCTGCCGCGCGTCCAGGCCGACCGGCAGGTCGGCCCTACCGCGTTCATCGAGAGGGCCGGAGTGAGGAGTGAGAACGGGTTTGATCACCGTAGCGAACAAGTCTCACTCTGGCTCCACCGCAAAGGCGCCGCGCCTTCCGACCGCGGCCCGTTGGTCATTCCTGGTTCGCGCGGGACGTTTAGTTACCTGGTTCAGCCGTGTGGCGATGGCACGTCGCACGCGTGGTCACTGGCCCACGGCGCGGGCCGCAAGTGGACCCGCAGCGACAGCCGCGCCCGTGTGCGCGAGCGTTTTCGGCCGGCGCAGCTTGTTCAGACCGGGCTCGGTGGCCGCGTCGTTTGCGGCGACCGCAGCCTGCTCTACGAGGAGGCTCCTCCGGCCTACAAGAACATCGAGCAAGTGATCGAGGACCTCCGTGAAGCGGGGCTCATCACGGTCATCGCCACGTTGCGTCCGTTGCTCACCTACAAGACGCGCGCAGTTCGGCCCTGA
PROTEIN sequence
Length: 181
SITPVASPSPLNRGRDALPRVQADRQVGPTAFIERAGVRSENGFDHRSEQVSLWLHRKGAAPSDRGPLVIPGSRGTFSYLVQPCGDGTSHAWSLAHGAGRKWTRSDSRARVRERFRPAQLVQTGLGGRVVCGDRSLLYEEAPPAYKNIEQVIEDLREAGLITVIATLRPLLTYKTRAVRP*