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PLM3_30_b2_sep16_scaffold_1123_12

Organism: PLM3_30_b2_sep16_Chthoniobacter_flavus_54_8

near complete RP 43 / 55 MC: 2 BSCG 48 / 51 MC: 1 ASCG 14 / 38
Location: comp(9972..10583)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily Tax=Chthoniobacter flavus Ellin428 RepID=B4CW59_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 64.5
  • Coverage: 203.0
  • Bit_score: 260
  • Evalue 8.10e-67
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:EDY21651.1}; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 64.5
  • Coverage: 203.0
  • Bit_score: 260
  • Evalue 1.10e-66
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 43.6
  • Coverage: 195.0
  • Bit_score: 157
  • Evalue 2.10e-36

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Taxonomy

Chthoniobacter flavus → Chthoniobacter → Spartobacteria → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 612
ATGCAAACGGAAGCGACTCTGGCTCAGGCCGATGTGTCGGACTTGGATTTGGTGACACGGTGCCAGGCTGGCGACACCGAAGCATTCGACGAGCTGGTAACCCGCTACCGAACACGAGTATTTGGCATGATTTACAACATGGTTCATAGCGAGCAGGACGCCTGGGACCTTTCTCAGGACAGCTTCCTTAAAGCATGGAAATCGATTAAGCGCTTTCGGGGACGCTCAACGTTTTACACCTGGATTTATCGAATCGTTATGAACGTGACGATTGATTGGCTCCGAAAAAAACAGATCAAAGGCGGAGGCGGCGAGTTCGACGATGCGATTCAGCTGAAGGAGGTTGAGCCGGCTTCCAAGACCGTCCCGAAGTCGGAAGCTTTGCCACACCAGATAATGGAACGGAGCGAAATTCGCGCCCGGATCGACAAAGCAATTGCGCAACTTTCACCCGAGCAACGCGCCGTCATTTTGATGAAGCAAATCGAAGAGATGCAATATCACGAAATCGCGGAAGCTCTCGGTTGCTCGATAGGCACGGTAATGTCGCGCCTGTTTTATGCGCGCAAGAAATTGCAAAATTTACTCAGAGACGTTTATGAGAACATTTGA
PROTEIN sequence
Length: 204
MQTEATLAQADVSDLDLVTRCQAGDTEAFDELVTRYRTRVFGMIYNMVHSEQDAWDLSQDSFLKAWKSIKRFRGRSTFYTWIYRIVMNVTIDWLRKKQIKGGGGEFDDAIQLKEVEPASKTVPKSEALPHQIMERSEIRARIDKAIAQLSPEQRAVILMKQIEEMQYHEIAEALGCSIGTVMSRLFYARKKLQNLLRDVYENI*