ggKbase home page

PLM3_30_b2_sep16_scaffold_3896_1

Organism: PLM3_30_b2_sep16_Chthoniobacter_flavus_54_8

near complete RP 43 / 55 MC: 2 BSCG 48 / 51 MC: 1 ASCG 14 / 38
Location: 3..1730

Top 3 Functional Annotations

Value Algorithm Source
Outer membrane receptor for ferrienterochelin and colicins Tax=Xanthomonas gardneri ATCC 19865 RepID=F0C0X9_9XANT similarity UNIREF
DB: UNIREF100
  • Identity: 27.1
  • Coverage: 384.0
  • Bit_score: 129
  • Evalue 6.10e-27
Uncharacterized protein {ECO:0000313|EMBL:AKC87742.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 25.3
  • Coverage: 554.0
  • Bit_score: 134
  • Evalue 4.50e-28
TonB-dependent receptor similarity KEGG
DB: KEGG
  • Identity: 24.9
  • Coverage: 486.0
  • Bit_score: 133
  • Evalue 1.20e-28

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pseudoxanthomonas suwonensis → Pseudoxanthomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1728
AGTCAACCTGGGTTGCGCGATGCGCTGCTGGACACAAATCCGGCCACGGCATTTAATCCGTTCGGTGGCTTTTTCCACCAAAACACCGGGGCCGCGAGGCAAAGAGTTTATGTGACATTGCATAACTCCGGTGAGTATGAGTTACCGATTTACTACGCCACCTTTAACGGTGACCTGTTCAATCTTCCCGCAGGGCCGGTTTCCTTTGCCATTGGCGGCGAGTACGACGCGCCGAGGTTCACTCGCGATCGAGACGTACTCAATACCACGTTTAATTCCATTGGCTCGGTGGACGGTCAAAGCTTCCGTGTGAATCGGGATATCTGGGGCGTCTACGAGGAAGTGCGAGTGCCATTCACCAGTCCCACATGGAACTTCCCTGGGTTCTACAGTTTTGAGGTGGACTTTGCCGAGCGCGAGGAATGGTACAGCCAAAACACCTCTTCGGTGCTCCCTTCCGGACTCTTCCCGGCCACGCCGGCGGTGCACAGTACGTATAACGCGCAGAAGCCGAAGGTTTCAATCCGCTGGCAACCGCTTGATCCCAAGTATATCGGCGCAGTGACCCTGCGCGGTAGCTATACCGAGGCGTTCCATGCGCCGACACTGGGAGAACTTACCCCTGCGAGCACGCAAAACTTCCCAATCGTAGCAGATCCGTTTACCGCCGGCCAACCCATTGACAACCGGACCCAGCCTCAGATTGAGGAACGCATTCTAGGAAACCCCAATTTGCATCCGGAAGTGGCCTACGAATGGACCTACGGAATAGTTTACAGTCCGAAATGGGTCAAGGGCCTGACGCTGAGCGCCGATTGGTGGCATATTGATATGCGCGACATCGTAGCAACCCGAGGCGCGCAAACCCTCATCTTGGAGAATCCGCCGACCCCGGGTGTTCAGCAGAACGGGCCGTTTGTTTTCCGTTCGCCTAGTCTATTTCCCGGTCAGAATGGTCCGGTCAGCTTTATCATCGATCCGAGCGACAACCTTTCTGGCGCAGTCTTTGAAGGTCTAGACTACGAAGCGATCTATATTCTAGATTCGACGATCTTCGGCGGTGGCGATTGGGGCAGGTTAACGACAACGGTTAACGGCACCTGGCTATCCCGGGCTGAGTTTCAAGCTGCCTCCAACGTAAAGCGGGTCGGCATCGCGGGCGAATTTCTTCCGCCGGCATTTGCGTTAACCAGTTCGCTGCCGTGGCATCGGGCCAACTTTAGCATCTTCTATGATGGCCCGGCTGATACGTGGATGCAGGGCTTGGATGTGGGCGCGGTAGTCCACTGGACTGGTCAGTATGAGGATGACAATGCCAGTCTGACCGGAGGGAAGTTCAATGAGCCAAGGAGTGGTCCAATCGGTGGCGGTGATGAAATACGGGCGCGGAAAGTGTCCGCGTTAACTACACTTGACCTCCTCTTAAACTACACGTTTAACCTGCCGCCACCGGCCCCCGCGGAAGTGCCTGGCTTTGCCAAGGATGGTGGGAAGAACGTGAAGATGAAGGATGGCAAGGAAAAGAATGTCGTCCCAGTCTCCACGGCTGAGTATGGCTGCAACAACTGGAAGTGGTGGCTTAATAACACGACCGTCACGCTCGGGATGCAAAACGTGTTTGACGAGGATCCGCCGTTTGTTGCTGGATCCTTCGAGAACGGCTATGACGAGTCGCTGACCACCATCAAGGGTCGGTTCTGGTACGTCGGGCTAAAGAAGAGATTCTAA
PROTEIN sequence
Length: 576
SQPGLRDALLDTNPATAFNPFGGFFHQNTGAARQRVYVTLHNSGEYELPIYYATFNGDLFNLPAGPVSFAIGGEYDAPRFTRDRDVLNTTFNSIGSVDGQSFRVNRDIWGVYEEVRVPFTSPTWNFPGFYSFEVDFAEREEWYSQNTSSVLPSGLFPATPAVHSTYNAQKPKVSIRWQPLDPKYIGAVTLRGSYTEAFHAPTLGELTPASTQNFPIVADPFTAGQPIDNRTQPQIEERILGNPNLHPEVAYEWTYGIVYSPKWVKGLTLSADWWHIDMRDIVATRGAQTLILENPPTPGVQQNGPFVFRSPSLFPGQNGPVSFIIDPSDNLSGAVFEGLDYEAIYILDSTIFGGGDWGRLTTTVNGTWLSRAEFQAASNVKRVGIAGEFLPPAFALTSSLPWHRANFSIFYDGPADTWMQGLDVGAVVHWTGQYEDDNASLTGGKFNEPRSGPIGGGDEIRARKVSALTTLDLLLNYTFNLPPPAPAEVPGFAKDGGKNVKMKDGKEKNVVPVSTAEYGCNNWKWWLNNTTVTLGMQNVFDEDPPFVAGSFENGYDESLTTIKGRFWYVGLKKRF*